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Dong Xie
Dong Xie
Other namesWalter Xie
Department of Computer Science, University of Auckland
Verified email at cs.auckland.ac.nz - Homepage
Title
Cited by
Cited by
Year
Bayesian phylogenetics with BEAUti and the BEAST 1.7
AJ Drummond, MA Suchard, D Xie, A Rambaut
Molecular biology and evolution 29 (8), 1969-1973, 2012
107732012
Posterior summarization in Bayesian phylogenetics using Tracer 1.7
A Rambaut, AJ Drummond, D Xie, G Baele, MA Suchard
Systematic biology 67 (5), 901-904, 2018
80662018
BEAST 2: a software platform for Bayesian evolutionary analysis
R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ...
PLoS computational biology 10 (4), e1003537, 2014
63062014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
29512019
Tracer v1. 6
A Rambaut, MA Suchard, D Xie, AJ Drummond
Available from http://tree.bio.ed.ac.uk/software/tracer, 2014
1774*2014
Estimating the basic reproductive number from viral sequence data
T Stadler, R Kouyos, V von Wyl, S Yerly, J Böni, P Bürgisser, T Klimkait, ...
Molecular biology and evolution 29 (1), 347-357, 2012
2262012
Evaluating a multigene environmental DNA approach for biodiversity assessment
AJ Drummond, RD Newcomb, TR Buckley, D Xie, A Dopheide, ...
GigaScience 4 (1), s13742-015-0086-1, 2015
1772015
Computational performance and statistical accuracy of* BEAST and comparisons with other methods
HA Ogilvie, J Heled, D Xie, AJ Drummond
Systematic biology 65 (3), 381-396, 2016
1192016
Impacts of DNA extraction and PCR on DNA metabarcoding estimates of soil biodiversity
A Dopheide, D Xie, TR Buckley, AJ Drummond, RD Newcomb
Methods in Ecology and Evolution 10 (1), 120-133, 2019
732019
Posterior summarization in Bayesian phylogenetics using Tracer 1.7. Systematic biology67 (5): 901-904
A Rambaut, AJ Drummond, D Xie, G Baele, MA Suchard
572018
Estimating the biodiversity of terrestrial invertebrates on a forested island using DNA barcodes and metabarcoding data
A Dopheide, LK Tooman, S Grosser, B Agabiti, B Rhode, D Xie, ...
Ecological Applications 29 (4), e01877, 2019
522019
Phylodynamics reveals the role of human travel and contact tracing in controlling the first wave of COVID-19 in four island nations
J Douglas, FK Mendes, R Bouckaert, D Xie, CL Jiménez-Silva, ...
Virus evolution 7 (2), veab052, 2021
372021
Simple fuzzy logic rules based on fuzzy decision tree for classification and prediction problem
JF Baldwin, D Xie
Intelligent Information Processing II: IFIP TC12/WG12. 3 International …, 2005
362005
Fuzzy association rules discovered on effective reduced database algorithm
D Xie
The 14th IEEE International Conference on Fuzzy Systems, 2005. FUZZ'05., 779-784, 2005
352005
Inferring host roles in bayesian phylodynamics of global avian influenza A virus H9N2
J Yang, D Xie, Z Nie, B Xu, AJ Drummond
Virology 538, 86-96, 2019
192019
Divergence dating tutorial with BEAST 2.0
AJ Drummond, A Rambaut, R Bouckaert, W Xie
192012
Object-oriented knowledge framework for modelling human mastication of foods
D Xie, WL Xu, KD Foster, J Bronlund
Expert Systems with Applications 36 (3), 4810-4821, 2009
72009
Fuzzy prototype model and semantic distance
DW Xie, JF Baldwin
Information Systems 32 (7), 944-967, 2007
72007
LinguaPhylo: a probabilistic model specification language for reproducible phylogenetic analyses
AJ Drummond, K Chen, FK Mendes, D Xie
PLOS Computational Biology 19 (7), e1011226, 2023
62023
Bayesian Skyline Plot Tutorial
AJ Drummond, A Rambaut, W Xie
Beast, 2011
32011
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Articles 1–20