Anders Krogh

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Gunnar von HeijneStockholm UniversityVerified email at dbb.su.se
Sean R. EddyHHMI & Harvard UniversityVerified email at fas.harvard.edu
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
Anders Jacobsen SkanderupGenome Institute of SingaporeVerified email at gis.a-star.edu.sg
Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenVerified email at cpr.ku.dk
Anders H. LundBRIC, University of CopenhagenVerified email at bric.ku.dk
Ole WintherBiology, Univ of Copenhagen, Genomic Medicine, Rigshospitalet and Technical University of DenmarkVerified email at bio.ku.dk
David HausslerScientific Director, UC Santa Cruz Genomics Institute, University of California, Santa CruzVerified email at soe.ucsc.edu
Morten LindowRoche, Therapeutic ModalitiesVerified email at roche.com
Peter MenzelLabor Berlin - Charité Vivantes GmbHVerified email at laborberlin.com
Kimmen SjolanderProfessor of Bioengineering, University of California, BerkeleyVerified email at berkeley.edu
Jiayu WenAssociate Professor, John Curtin School of Medical Research, The Australian National UniversityVerified email at anu.edu.au
Eivind ValenProfessor, University of OsloVerified email at fas.harvard.edu
Albin SandelinThe Bioinformatics Centre, Department of Biology & BRIC, Copenhagen UniversityVerified email at binf.ku.dk
Lukas KällProfessor, Science for Life Laboratory, KTH Royal Institute of TechnologyVerified email at kth.se
Stinus LindgreenCurrent Member of ParliamentVerified email at ft.dk
Richard HugheyProfessor of Computer Engineering and Biomolecular Engineering, University of California Santa CruzVerified email at soe.ucsc.edu
Henrik NielsenAssociate Professor, Department of Health Technology, Technical University of DenmarkVerified email at dtu.dk
Piero FariselliDept. of Medical Sciences, University of Torino, ItalyVerified email at unito.it
Kyoung Jae WonCedars-Sinai Medical CenterVerified email at cshs.org

Anders Krogh

Department of Computer Science and Center for Health Data Science, University of Copenhagen

Verified email at di.ku.dk - Homepage

Bioinformatics data science machine learning


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Predicting transmembrane protein topology with a hidden markov model: application to complete genomes A Krogh, B Larsson, G Von Heijne, ELL Sonnhammer Journal of molecular biology 305 (3), 567-580, 2001	13534	2001
Introduction to the theory of neural computation JA Hertz, A Krogh, RG Palmer Addison-Wesley, 1991	12261*	1991
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence ST Cole, R Brosch, J Parkhill, T Garnier, C Churcher, D Harris, SV Gordon, ... Nature 396 (6707), 190-190, 1998	10073	1998
Biological sequence analysis: probabilistic models of proteins and nucleic acids R Durbin, SR Eddy, A Krogh, G Mitchison Cambridge university press, 1998	8109	1998
A hidden Markov model for predicting transmembrane helices in protein sequences. ELL Sonnhammer, G Von Heijne, A Krogh Ismb 6, 175-182, 1998	3227	1998
Neural Network Ensembles, Cross Validation, and Active Learning A Krogh, J Vedelsby Advances in neural information processing systems 7 7, 231, 1995	2913	1995
Hidden Markov models in computational biology: Applications to protein modeling A Krogh, M Brown, IS Mian, K Sjölander, D Haussler Journal of molecular biology 235 (5), 1501-1531, 1994	2755	1994
A combined transmembrane topology and signal peptide prediction method L Käll, A Krogh, ELL Sonnhammer Journal of molecular biology 338 (5), 1027-1036, 2004	2521	2004
A simple weight decay can improve generalization A Krogh, JA Hertz Advances in neural information processing systems 4 (1995), 950-957, 1995	2253*	1995
Advantages of combined transmembrane topology and signal peptide prediction—the Phobius web server L Käll, A Krogh, ELL Sonnhammer Nucleic acids research 35 (suppl_2), W429-W432, 2007	1642	2007
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18 J Parkhill, G Dougan, KD James, NR Thomson, D Pickard, J Wain, ... Nature 413 (6858), 848-852, 2001	1483	2001
Programmed cell death 4 (PDCD4) is an important functional target of the microRNA miR-21 in breast cancer cells LB Frankel, NR Christoffersen, A Jacobsen, M Lindow, A Krogh, AH Lund Journal of Biological Chemistry 283 (2), 1026-1033, 2008	1452	2008
Fast and sensitive taxonomic classification for metagenomics with Kaiju. Nat Commun 7: 11257 P Menzel, KL Ng, A Krogh	1448*	2016
Prediction of lipoprotein signal peptides in Gram‐negative bacteria AS Juncker, H Willenbrock, G Von Heijne, S Brunak, H Nielsen, A Krogh Protein Science 12 (8), 1652-1662, 2003	1302	2003
Ancient human genome sequence of an extinct Palaeo-Eskimo M Rasmussen, Y Li, S Lindgreen, JS Pedersen, A Albrechtsen, I Moltke, ... Nature 463 (7282), 757-762, 2010	966	2010
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013	940	2013
An Aboriginal Australian genome reveals separate human dispersals into Asia M Rasmussen, X Guo, Y Wang, KE Lohmueller, S Rasmussen, ... Science 334 (6052), 94-98, 2011	853	2011
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ... Nucleic acids research 36 (suppl_1), D102-D106, 2007	818	2007
Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization C Qin, C Yu, Y Shen, X Fang, L Chen, J Min, J Cheng, S Zhao, M Xu, ... Proceedings of the National Academy of Sciences 111 (14), 5135-5140, 2014	777	2014
Prediction of signal peptides and signal anchors by a hidden Markov model. H Nielsen, A Krogh Ismb 6, 122-130, 1998	728	1998

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