| Convergent regulatory evolution and loss of flight in paleognathous birds TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu, NE Wheeler, PP Gardner, ... Science 364 (6435), 74-78, 2019 | 45 | 2019 |
| Robust identification of noncoding RNA from transcriptomes requires phylogenetically-informed sampling S Lindgreen, SU Umu, ASW Lai, H Eldai, W Liu, S McGimpsey, ... PLoS computational biology 10 (10), 2014 | 32 | 2014 |
| Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica NE Wheeler, PP Gardner, L Barquist PLoS genetics 14 (5), 2018 | 17 | 2018 |
| Why so narrow: distribution of anti-sense regulated, type I toxin-antitoxin systems compared with type II and type III systems DS Coray, NE Wheeler, JA Heinemann, PP Gardner RNA biology 14 (3), 275-280, 2017 | 16 | 2017 |
| A profile-based method for identifying functional divergence of orthologous genes in bacterial genomes NE Wheeler, L Barquist, RA Kingsley, PP Gardner Bioinformatics 32 (23), 3566-3574, 2016 | 14 | 2016 |
| Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis JA Lees, B Ferwerda, PHC Kremer, NE Wheeler, MV Serón, NJ Croucher, ... Nature communications 10 (1), 1-14, 2019 | 7 | 2019 |
| Breaking the code of antibiotic resistance SW Lo, N Kumar, NE Wheeler Nature Reviews Microbiology 16 (5), 262-262, 2018 | 7 | 2018 |
| Convergent regulatory evolution and the origin of flightlessness in palaeognathous birds. bioRxiv [Internet]: 262584 TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu, NE Wheeler, PP Gardner, ... | 7 | 2018 |
| Tracing outbreaks with machine learning NE Wheeler Nature Reviews Microbiology 17 (5), 269, 2019 | 5 | 2019 |
| Convergent regulatory evolution and the origin of flightlessness in palaeognathous birds. bioRxiv: 262584 TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu, NE Wheeler, PP Gardner, ... | 5 | 2018 |
| Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data AL Hicks, N Wheeler, L Sánchez-Busó, JL Rakeman, SR Harris, YH Grad PLoS computational biology 15 (9), e1007349, 2019 | 3 | 2019 |
| An African Salmonella Typhimurium ST313 sublineage with extensive drug-resistance and signatures of host adaptation S Van Puyvelde, D Pickard, K Vandelannoote, E Heinz, B Barbé, ... Nature communications 10 (1), 1-12, 2019 | 2 | 2019 |
| Genomic, transcriptomic, and phenotypic analyses of Neisseria meningitidis isolates from disease patients and their household contacts X Ren, DA Eccles, GA Greig, J Clapham, NE Wheeler, S Lindgreen, ... MSystems 2 (6), e00127-17, 2017 | 2 | 2017 |
| We are falling behind on TB elimination targets: can whole-genome sequencing guide our efforts? N Wheeler Thorax 74 (9), 833-834, 2019 | 1 | 2019 |
| Genomic correlates of extraintestinal infection are linked with changes in cell morphology in Campylobacter jejuni NE Wheeler, T Blackmore, AD Reynolds, AC Midwinter, J Marshall, ... Microbial genomics 5 (2), 2019 | 1 | 2019 |
| Increased antibiotic susceptibility in Neisseria gonorrhoeae through adaptation to the cervical environment KC Ma, TD Mortimer, AL Hicks, NE Wheeler, L Sánchez-Busó, ... bioRxiv, 2020 | | 2020 |
| MYCOBACTERIUM ABSCESSUS POINT SOURCE OUTBREAK IN THE LOCAL POTABLE WATER SUPPLY AFFECTING PEOPLE WITH CYSTIC FIBROSIS RE Stockwell, R Thomson, LE Leong, NE Wheeler, J Bryant, ME Wood, ... Pediatric Pulmonology 54, S300-S300, 2019 | | 2019 |
| POTABLE WATER AS A POSSIBLE SOURCE OF MYCOBACTERIUM ABSCESSUS INFECTION IN PEOPLE WITH CHRONIC LUNG CONDITIONS R Stockwell, L Leong, N Wheeler, J Bryant, M Wood, L Sherrard, ... RESPIROLOGY 24, 42-42, 2019 | | 2019 |
| Improved inference and prediction of bacterial genotype-phenotype associations using pangenome-spanning regressions JA Lees, TT Mai, M Galardini, NE Wheeler, J Corander BioRxiv, 852426, 2019 | | 2019 |
| Evolution of Salmonella enterica serotype Typhimurium driven by anthropogenic selection and niche adaptation M Bawn, G Thilliez, M Kirkwood, N Wheeler, L Petrovska, TJ Dallman, ... bioRxiv, 804674, 2019 | | 2019 |
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
