Nicole E Wheeler
Nicole E Wheeler
Data Scientist, Wellcome Sanger Institute
Verified email at sanger.ac.uk
TitleCited byYear
Robust identification of noncoding RNA from transcriptomes requires phylogenetically-informed sampling
S Lindgreen, SU Umu, ASW Lai, H Eldai, W Liu, S McGimpsey, ...
PLoS computational biology 10 (10), e1003907, 2014
282014
Convergent regulatory evolution and loss of flight in paleognathous birds
TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu, NE Wheeler, PP Gardner, ...
Science 364 (6435), 74-78, 2019
18*2019
A profile-based method for identifying functional divergence of orthologous genes in bacterial genomes
NE Wheeler, L Barquist, RA Kingsley, PP Gardner
Bioinformatics 32 (23), 3566-3574, 2016
102016
Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica
NE Wheeler, PP Gardner, L Barquist
PLoS genetics 14 (5), e1007333, 2018
92018
Why so narrow: distribution of anti-sense regulated, type I toxin-antitoxin systems compared with type II and type III systems
DS Coray, NE Wheeler, JA Heinemann, PP Gardner
RNA biology 14 (3), 275-280, 2017
82017
Breaking the code of antibiotic resistance
SW Lo, N Kumar, NE Wheeler
Nature Reviews Microbiology 16 (5), 262, 2018
32018
Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis
JA Lees, B Ferwerda, PHC Kremer, NE Wheeler, MV Serón, NJ Croucher, ...
Nature communications 10 (1), 2176, 2019
12019
Tracing outbreaks with machine learning
NE Wheeler
Nature Reviews Microbiology 17 (5), 269, 2019
12019
Genomic, Transcriptomic, and Phenotypic Analyses of Neisseria meningitidis Isolates from Disease Patients and Their Household Contacts
X Ren, DA Eccles, GA Greig, J Clapham, NE Wheeler, S Lindgreen, ...
MSystems 2 (6), e00127-17, 2017
12017
We are falling behind on TB elimination targets: can whole-genome sequencing guide our efforts?
N Wheeler
Thorax 74 (9), 833-834, 2019
2019
POTABLE WATER AS A POSSIBLE SOURCE OF MYCOBACTERIUM ABSCESSUS INFECTION IN PEOPLE WITH CHRONIC LUNG CONDITIONS
R Stockwell, L Leong, N Wheeler, J Bryant, M Wood, L Sherrard, ...
RESPIROLOGY 24, 42-42, 2019
2019
Genomic correlates of extraintestinal infection are linked with changes in cell morphology in Campylobacter jejuni
NE Wheeler, T Blackmore, AD Reynolds, AC Midwinter, J Marshall, ...
Microbial genomics 5 (2), 2019
2019
Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data
AL Hicks, N Wheeler, L Sanchez-Buso, JL Rakeman, SR Harris, YH Grad
bioRxiv, 607127, 2019
2019
PREVALENCE OF SHARED MYCOBACTERIUM ABSCESSUS COMPLEX IN THE QUEENSLAND CYSTIC FIBROSIS POPULATION
RE Stockwell, L Leong, N Wheeler, J Bryant, ME Wood, L Sherrard, ...
PEDIATRIC PULMONOLOGY 53, 283-283, 2018
2018
Genetic risk variants for heart failure onset and progression do not improve prediction of mortality beyond established prognostic neurohormonal and echocardiographic markers
AP Pilbrow, EM Templeton, GD Gamble, NE Wheeler, CM Frampton, ...
EUROPEAN HEART JOURNAL 39, 995-996, 2018
2018
P058 Prevalence of shared Mycobacterium abscessus complex (MABSC) in the Queensland cystic fibrosis population
RE Stockwell, LEX Leong, NE Wheeler, JM Bryant, ME Wood, LJ Sherrard, ...
Journal of Cystic Fibrosis 17, S75, 2018
2018
Identifying functional adaptations associated with pathogenicity in bacteria.
NE Wheeler
University of Canterbury, 2017
2017
Expression Quantitative Trait Locus (eQTL) Map for Genetic Variants Associated With Cardiovascular Traits in Human Heart
NE Wheeler, VA Cameron, JF Pearson, PP Gardener, CS Moravec, ...
Circulation 132 (suppl_3), A17027-A17027, 2015
2015
Abstract 17027: Expression Quantitative Trait Locus (eQTL) Map for Genetic Variants Associated With Cardiovascular Traits in Human Heart
AP Wheeler, N.E., Cameron, V.A., Pearson, J.F., Gardner, P.P., Moravec, C.S ...
Circulation 132 (A17027), 2015
2015
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Articles 1–19