A comparison of computational models for eukaryotic cell shape and motility WR Holmes, L Edelstein-Keshet PLoS computational biology 8 (12), e1002793, 2012 | 111 | 2012 |
The quality of response time data inference: A blinded, collaborative assessment of the validity of cognitive models G Dutilh, J Annis, SD Brown, P Cassey, NJ Evans, RPPP Grasman, ... Psychonomic bulletin & review 26 (4), 1051-1069, 2019 | 102 | 2019 |
Regimes of wave type patterning driven by refractory actin feedback: transition from static polarization to dynamic wave behaviour WR Holmes, AE Carlsson, L Edelstein-Keshet Physical biology 9 (4), 046005, 2012 | 85 | 2012 |
Synthetic spatially graded Rac activation drives cell polarization and movement B Lin, WR Holmes, CJ Wang, T Ueno, A Harwell, L Edelstein-Keshet, ... Proceedings of the National Academy of Sciences 109 (52), E3668-E3677, 2012 | 77 | 2012 |
From simple to detailed models for cell polarization L Edelstein-Keshet, WR Holmes, M Zajac, M Dutot Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013 | 74 | 2013 |
A practical guide to the Probability Density Approximation (PDA) with improved implementation and error characterization WR Holmes Journal of Mathematical Psychology 68, 13-24, 2015 | 66 | 2015 |
A new framework for modeling decisions about changing information: The Piecewise Linear Ballistic Accumulator model WR Holmes, JS Trueblood, A Heathcote Cognitive psychology 85, 1-29, 2016 | 62 | 2016 |
Modelling cell polarization driven by synthetic spatially graded Rac activation WR Holmes, B Lin, A Levchenko, L Edelstein-Keshet PLoS computational biology 8 (6), e1002366, 2012 | 60 | 2012 |
Analysis of a minimal Rho-GTPase circuit regulating cell shape WR Holmes, L Edelstein-Keshet Physical Biology 13 (4), 046001, 2016 | 53 | 2016 |
A mathematical model coupling polarity signaling to cell adhesion explains diverse cell migration patterns WR Holmes, JS Park, A Levchenko, L Edelstein-Keshet PLoS computational biology 13 (5), e1005524, 2017 | 44 | 2017 |
Mechanochemical feedback underlies coexistence of qualitatively distinct cell polarity patterns within diverse cell populations JS Park, WR Holmes, SH Lee, HN Kim, DH Kim, MK Kwak, CJ Wang, ... Proceedings of the National Academy of Sciences 114 (28), E5750-E5759, 2017 | 42 | 2017 |
Computational modeling of single‐cell mechanics and cytoskeletal mechanobiology V Rajagopal, WR Holmes, PVS Lee Wiley Interdisciplinary Reviews: Systems Biology and Medicine 10 (2), e1407, 2018 | 35 | 2018 |
Local perturbation analysis: a computational tool for biophysical reaction-diffusion models WR Holmes, MA Mata, L Edelstein-Keshet Biophysical journal 108 (2), 230-236, 2015 | 35 | 2015 |
The interplay between Wnt mediated expansion and negative regulation of growth promotes robust intestinal crypt structure and homeostasis H Du, Q Nie, WR Holmes PLoS computational biology 11 (8), e1004285, 2015 | 34 | 2015 |
An efficient, nonlinear stability analysis for detecting pattern formation in reaction diffusion systems WR Holmes Bulletin of mathematical biology 76 (1), 157-183, 2014 | 33 | 2014 |
Response-time data provide critical constraints on dynamic models of multi-alternative, multi-attribute choice NJ Evans, WR Holmes, JS Trueblood Psychonomic Bulletin & Review 26 (3), 901-933, 2019 | 32 | 2019 |
Computational modelling of epidermal stratification highlights the importance of asymmetric cell division for predictable and robust layer formation A Gord, WR Holmes, X Dai, Q Nie Journal of the Royal Society Interface 11 (99), 20140631, 2014 | 31 | 2014 |
A model for intracellular actin waves explored by nonlinear local perturbation analysis MA Mata, M Dutot, L Edelstein-Keshet, WR Holmes Journal of theoretical biology 334, 149-161, 2013 | 30 | 2013 |
Bayesian analysis of the piecewise diffusion decision model WR Holmes, JS Trueblood Behavior research methods 50 (2), 730-743, 2018 | 27 | 2018 |
Gene expression noise enhances robust organization of the early mammalian blastocyst WR Holmes, NS Reyes de Mochel, Q Wang, H Du, T Peng, M Chiang, ... PLoS computational biology 13 (1), e1005320, 2017 | 27 | 2017 |