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Ruy Jauregui
Ruy Jauregui
Bioinformatics scientist, Ministry for Primary Industries
Verified email at agresearch.co.nz
Title
Cited by
Cited by
Year
Target Genes of the MADS Transcription Factor SEPALLATA3: Integration of Developmental and Hormonal Pathways in the Arabidopsis Flower
K Kaufmann, JM Muino, R Jauregui, CA Airoldi, C Smaczniak, ...
PLoS biology 7 (4), e1000090, 2009
4822009
Characterisation of the human uterine microbiome in non-pregnant women through deep sequencing of the V1-2 region of the 16S rRNA gene
H Verstraelen, R Vilchez-Vargas, F Desimpel, R Jauregui, ...
PeerJ 4, e1602, 2016
3472016
Comparing the anterior nare bacterial community of two discrete human populations using I llumina amplicon sequencing
A Camarinha‐Silva, R JŠuregui, D Chaves‐Moreno, APA Oxley, ...
Environmental microbiology 16 (9), 2939-2952, 2014
2092014
Inoculum selection is crucial to ensure operational stability in anaerobic digestion
J De Vrieze, S Gildemyn, R Vilchez-Vargas, R JŠuregui, DH Pieper, ...
Applied microbiology and biotechnology 99, 189-199, 2015
1452015
Co-occurrence analysis of microbial taxa in the Atlantic Ocean reveals high connectivity in the free-living bacterioplankton
M Milici, ZL Deng, J Tomasch, J Decelle, ML Wos-Oxley, H Wang, ...
Frontiers in microbiology 7, 649, 2016
1372016
Product diversity linked to substrate usage in chain elongation by mixed-culture fermentation
M Coma, R Vilchez-Vargas, H Roume, R Jauregui, DH Pieper, K Rabaey
Environmental science & technology 50 (12), 6467-6476, 2016
1272016
Beyond microarrays: Finding key transcription factors controlling signal transduction pathways
A Kel, N Voss, R Jauregui, O Kel-Margoulis, E Wingender
BMC bioinformatics 7, 1-13, 2006
1182006
High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis
SP Szafranski, ML Wos-Oxley, R Vilchez-Vargas, R JŠuregui, I Plumeier, ...
Applied and environmental microbiology 81 (3), 1047-1058, 2015
1022015
Optimized cryopreservation of mixed microbial communities for conserved functionality and diversity
FM Kerckhof, ENP Courtens, A Geirnaert, S Hoefman, A Ho, ...
PloS one 9 (6), e99517, 2014
942014
Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota
T Chalermwatanachai, R Vilchez-Vargas, G Holtappels, T Lacoere, ...
Scientific reports 8 (1), 7926, 2018
902018
Mineral and organic growing media have distinct community structure, stability and functionality in soilless culture systems
O Grunert, E Hernandez-Sanabria, R Vilchez-Vargas, R Jauregui, ...
Scientific reports 6 (1), 18837, 2016
842016
Conservation of DNA curvature signals in regulatory regions of prokaryotic genes
R Jauregui, C Abreu‐Goodger, G Moreno‐Hagelsieb, J Collado‐Vides, ...
Nucleic acids research 31 (23), 6770-6777, 2003
832003
The full-scale anaerobic digestion microbiome is represented by specific marker populations
J De Vrieze, L Raport, H Roume, R Vilchez-Vargas, R JŠuregui, ...
Water research 104, 101-110, 2016
792016
High-resolution transcriptomic analysis of the adaptive response of Staphylococcus aureus during acute and chronic phases of osteomyelitis
AK Szafranska, APA Oxley, D Chaves-Moreno, SA Horst, S RoŖlenbroich, ...
MBio 5 (6), 10.1128/mbio. 01775-14, 2014
782014
In vitro colonisation of the distal colon by Akkermansia muciniphila is largely mucin and pH dependent
F Van Herreweghen, P Van den Abbeele, T De Mulder, R De Weirdt, ...
Beneficial microbes 8 (1), 81-96, 2017
762017
High-rate activated sludge communities have a distinctly different structure compared to low-rate sludge communities, and are less sensitive towards environmental and†…
FA Meerburg, SE Vlaeminck, H Roume, D Seuntjens, DH Pieper, ...
Water Research 100, 137-145, 2016
762016
Reinforcement of intestinal epithelial barrier by arabinoxylans in overweight and obese subjects: A randomized controlled trial: Arabinoxylans in gut barrier
BN Salden, FJ Troost, E Wilms, P Truchado, R Vilchez-Vargas, DH Pieper, ...
Clinical Nutrition 37 (2), 471-480, 2018
752018
Presence does not imply activity: DNA and RNA patterns differ in response to salt perturbation in anaerobic digestion
J De Vrieze, L Regueiro, R Props, R Vilchez-Vargas, R JŠuregui, ...
Biotechnology for biofuels 9, 1-13, 2016
732016
Low diversity of planktonic bacteria in the tropical ocean
M Milici, J Tomasch, ML Wos-Oxley, H Wang, R JŠuregui, ...
Scientific Reports 6, 2016
712016
A Metaproteomics Approach to Elucidate Host and Pathogen Protein Expression during Catheter-Associated Urinary Tract Infections (CAUTIs)[S]
C Lassek, M Burghartz, D Chaves-Moreno, A Otto, C Hentschker, S Fuchs, ...
Molecular & Cellular Proteomics 14 (4), 989-1008, 2015
672015
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Articles 1–20