Eugene Koonin
Eugene Koonin
Senior Investigator, NCBI, NIH
Verified email at - Homepage
Cited by
Cited by
Initial sequencing and analysis of the human genome
US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ...
Nature 409 (6822), 860-921, 2001
The COG database: an updated version includes eukaryotes
RL Tatusov, ND Fedorova, JD Jackson, AR Jacobs, B Kiryutin, EV Koonin, ...
BMC bioinformatics 4, 1-14, 2003
Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system
B Zetsche, JS Gootenberg, OO Abudayyeh, IM Slaymaker, KS Makarova, ...
cell 163 (3), 759-771, 2015
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov, MY Galperin, DA Natale, EV Koonin
Nucleic acids research 28 (1), 33-36, 2000
A genomic perspective on protein families
RL Tatusov, EV Koonin, DJ Lipman
Science 278 (5338), 631-637, 1997
Small CRISPR RNAs guide antiviral defense in prokaryotes
SJJ Brouns, MM Jore, M Lundgren, ER Westra, RJH Slijkhuis, ...
Science 321 (5891), 960-964, 2008
Evolution and classification of the CRISPR–Cas systems
KS Makarova, DH Haft, R Barrangou, SJJ Brouns, E Charpentier, ...
Nature Reviews Microbiology 9 (6), 467-477, 2011
In vivo genome editing using Staphylococcus aureus Cas9
FA Ran, L Cong, WX Yan, DA Scott, JS Gootenberg, AJ Kriz, B Zetsche, ...
Nature 520 (7546), 186-191, 2015
An updated evolutionary classification of CRISPR–Cas systems
KS Makarova, YI Wolf, OS Alkhnbashi, F Costa, SA Shah, SJ Saunders, ...
Nature reviews microbiology 13 (11), 722-736, 2015
Nucleic acid detection with CRISPR-Cas13a/C2c2
JS Gootenberg, OO Abudayyeh, JW Lee, P Essletzbichler, AJ Dy, J Joung, ...
Science 356 (6336), 438-442, 2017
The COG database: new developments in phylogenetic classification of proteins from complete genomes
RL Tatusov, DA Natale, IV Garkavtsev, TA Tatusova, UT Shankavaram, ...
Nucleic acids research 29 (1), 22-28, 2001
AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
AF Neuwald, L Aravind, JL Spouge, EV Koonin
Genome research 9 (1), 27-43, 1999
De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-κB signalling
IE Wertz, KM O'rourke, H Zhou, M Eby, L Aravind, S Seshagiri, P Wu, ...
Nature 430 (7000), 694-699, 2004
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector
OO Abudayyeh, JS Gootenberg, S Konermann, J Joung, IM Slaymaker, ...
Science 353 (6299), aaf5573, 2016
Molecular cloning and disease association of hepatitis G virus: a transfusion-transmissible agent
J Linnen, J Wages Jr, ZY Zhang-Keck, KE Fry, KZ Krawczynski, H Alter, ...
Science 271 (5248), 505-508, 1996
Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis
RS Stephens, S Kalman, C Lammel, J Fan, R Marathe, L Aravind, ...
Science 282 (5389), 754-759, 1998
Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants
KS Makarova, YI Wolf, J Iranzo, SA Shmakov, OS Alkhnbashi, SJJ Brouns, ...
Nature Reviews Microbiology 18 (2), 67-83, 2020
Bacterial rhodopsin: evidence for a new type of phototrophy in the sea
O Béja, L Aravind, EV Koonin, MT Suzuki, A Hadd, LP Nguyen, ...
Science 289 (5486), 1902-1906, 2000
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and …
KS Makarova, NV Grishin, SA Shabalina, YI Wolf, EV Koonin
Biology direct 1, 1-26, 2006
Comparative genomics of the lactic acid bacteria
K Makarova, A Slesarev, Y Wolf, A Sorokin, B Mirkin, E Koonin, A Pavlov, ...
Proceedings of the National Academy of Sciences 103 (42), 15611-15616, 2006
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