| Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ... Nature microbiology 3 (7), 804-813, 2018 | 477 | 2018 |
| Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ... Genome biology 21, 1-35, 2020 | 144 | 2020 |
| Dietary tryptophan metabolite released by intratumoral Lactobacillus reuteri facilitates immune checkpoint inhibitor treatment MJ Bender, AC McPherson, CM Phelps, SP Pandey, CR Laughlin, ... Cell 186 (9), 1846-1862. e26, 2023 | 109 | 2023 |
| Mucus Sugar Content Shapes the Bacterial Community Structure in Thermally Stressed Acropora muricata STM Lee, SK Davy, SL Tang, PS Kench Frontiers in microbiology 7, 371, 2016 | 91 | 2016 |
| Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics Sonny T. M. Lee, Stacy A. Kahn, Tom O. Delmont, Alon Shaiber, Özcan C. Esen ... Microbiome 5 (1), 50, 2017 | 88* | 2017 |
| Successive shifts in the microbial community of the surface mucus layer and tissues of the coral Acropora muricata under thermal stress STM Lee, SK Davy, SL Tang, TY Fan, PS Kench FEMS microbiology ecology 91 (12), fiv142, 2015 | 87 | 2015 |
| Prevalence of potential nitrogen‐fixing, green sulfur bacteria in the skeleton of reef‐building coral Isopora palifera SH Yang, STM Lee, CR Huang, CH Tseng, PW Chiang, CP Chen, ... Limnology and oceanography 61 (3), 1078-1086, 2016 | 64 | 2016 |
| Prospective correlation between the patient microbiome with response to and development of immune-mediated adverse effects to immunotherapy in lung cancer J Chau, M Yadav, B Liu, M Furqan, Q Dai, S Shahi, A Gupta, KN Mercer, ... BMC cancer 21, 1-14, 2021 | 43 | 2021 |
| Metabolic independence drives gut microbial colonization and resilience in health and disease AR Watson, J Füssel, I Veseli, JZ DeLongchamp, M Silva, F Trigodet, ... Genome biology 24 (1), 78, 2023 | 42* | 2023 |
| Long-Term Survey Is Necessary to Reveal Various Shifts of Microbial Composition in Corals Y Shan-Hua, T Ching-Hung, H Chang-Rung, C Chung-Pin, T Kshitij, ... Frontiers in Microbiology 8 (1094), 2017 | 42 | 2017 |
| The contribution of the human oral microbiome to oral disease: a review AG Morrison, S Sarkar, S Umar, STM Lee, SM Thomas Microorganisms 11 (2), 318, 2023 | 26 | 2023 |
| Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10–/–Mice J Miyoshi, S Miyoshi, TO Delmont, C Cham, STM Lee, A Sakatani, K Yang, ... Gastroenterology 161 (3), 940-952. e15, 2021 | 23 | 2021 |
| Water flow buffers shifts in bacterial community structure in heat-stressed Acropora muricata STM Lee, SK Davy, SL Tang, PS Kench Scientific Reports 7, 43600, 2017 | 23 | 2017 |
| Transcriptomic response in Acropora muricata under acute temperature stress follows preconditioned seasonal temperature fluctuations STM Lee, S Keshavmurthy, S Fontana, M Takuma, WH Chou, CA Chen BMC research notes 11, 1-7, 2018 | 16 | 2018 |
| Baseline seabed habitat and biotope mapping for a proposed marine reserve Sonny T M Lee, Michelle Kelly, Tim J Langlois, Mark J Costello PeerJ, 2015 | 16 | 2015 |
| D155Y Substitution of SARS-CoV-2 ORF3a Weakens Binding with Caveolin-1: An in silico Study S Gupta, D Mallick, K Banerjee, S Sarkar, STM Lee, P Basuchowdhuri, ... bioRxiv, 2021 | 11* | 2021 |
| Pseudomonas cultivated from Andropogon gerardii rhizosphere show functional potential for promoting plant host growth and drought resilience S Sarkar, A Kamke, K Ward, E Hartung, Q Ran, B Feehan, M Galliart, ... BMC genomics 23 (1), 784, 2022 | 7* | 2022 |
| Bacterial but not fungal rhizosphere community composition differ among perennial grass ecotypes under abiotic environmental stress S Sarkar, A Kamke, K Ward, AK Rudick, SG Baer, QH Ran, B Feehan, ... Microbiology Spectrum 10 (3), e02391-21, 2022 | 7 | 2022 |
| Metagenomic alterations in gut microbiota precede and predict onset of colitis in the IL10 gene-deficient murine model J Miyoshi, STM Lee, M Kennedy, M Puertolas, M Frith, JC Koval, ... Cellular and Molecular Gastroenterology and Hepatology 11 (2), 491-502, 2021 | 7 | 2021 |
| Stability and volatility shape the gut bacteriome and Kazachstania slooffiae dynamics in preweaning, nursery and adult pigs STML Brandi Feehan, Qinghong Ran, Victoria Dorman, Kourtney Rumback, Sophia ... Sci Rep 12 (15080. https://doi.org/10.1038/s41598-02), 2022 | 5 | 2022 |
