Fragmentation of contaminant and endogenous DNA in ancient samples determined by shotgun sequencing; prospects for human palaeogenomics M Garcia-Garcera, E Gigli, F Sanchez-Quinto, O Ramirez, F Calafell, ... PLoS One 6 (8), e24161, 2011 | 96 | 2011 |
Abundance and co-occurrence of extracellular capsules increase environmental breadth: Implications for the emergence of pathogens O Rendueles, M Garcia-Garcerà, B Néron, M Touchon, EPC Rocha PLoS pathogens 13 (7), e1006525, 2017 | 83 | 2017 |
Challenges in clinical metaproteomics highlighted by the analysis of acute leukemia patients with gut colonization by multidrug-resistant enterobacteriaceae J Rechenberger, P Samaras, A Jarzab, J Behr, M Frejno, A Djukovic, ... Proteomes 7 (1), 2, 2019 | 65 | 2019 |
A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach C d’Humières, M Touchon, S Dion, J Cury, A Ghozlane, M Garcia-Garcera, ... Scientific Reports 9 (1), 11331, 2019 | 54 | 2019 |
Lactobacillus supports Clostridiales to restrict gut colonization by multidrug-resistant Enterobacteriaceae A Djukovic, MJ Garzón, C Canlet, V Cabral, R Lalaoui, M García-Garcerá, ... Nature Communications 13 (1), 5617, 2022 | 53 | 2022 |
Human commensal gut Proteobacteria withstand type VI secretion attacks through immunity protein-independent mechanisms N Flaugnatti, S Isaac, LF Lemos Rocha, S Stutzmann, O Rendueles, ... Nature communications 12 (1), 5751, 2021 | 48 | 2021 |
Listeria monocytogenes faecal carriage is common and depends on the gut microbiota L Hafner, M Pichon, C Burucoa, SHA Nusser, A Moura, M Garcia-Garcera, ... Nature Communications 12 (1), 6826, 2021 | 40 | 2021 |
Community diversity and habitat structure shape the repertoire of extracellular proteins in bacteria M Garcia-Garcera, EPC Rocha Nature Communications 11 (1), 758, 2020 | 36 | 2020 |
A new method for extracting skin microbes allows metagenomic analysis of whole-deep skin M Garcia-Garcerà, K Garcia-Etxebarria, M Coscollà, A Latorre, F Calafell PLoS One 8 (9), e74914, 2013 | 35 | 2013 |
Metagenomic assessment of the interplay between the environment and the genetic diversification of Acinetobacter M Garcia‐Garcera, M Touchon, S Brisse, EPC Rocha Environmental microbiology 19 (12), 5010-5024, 2017 | 32 | 2017 |
Microbiome-mediated fructose depletion restricts murine gut colonization by vancomycin-resistant Enterococcus S Isaac, A Flor-Duro, G Carruana, L Puchades-Carrasco, A Quirant, ... Nature Communications 13 (1), 7718, 2022 | 29 | 2022 |
No major host genetic risk factor contributed to A (H1N1) 2009 influenza severity K Garcia-Etxebarria, MA Bracho, JC Galán, T Pumarola, J Castilla, ... PloS one 10 (9), e0135983, 2015 | 28 | 2015 |
Gut colonization by a novel Clostridium species is associated with the onset of epizootic rabbit enteropathy A Djukovic, M Garcia-Garcera, E Martínez-Paredes, S Isaac, A Artacho, ... Veterinary research 49, 1-14, 2018 | 27 | 2018 |
Consistency of metagenomic assignment programs in simulated and real data K Garcia-Etxebarria, M Garcia-Garcerà, F Calafell BMC bioinformatics 15, 1-10, 2014 | 25 | 2014 |
Direct sequencing from the minimal number of DNA molecules needed to fill a 454 picotiterplate M Džunková, M Garcia-Garcera, L Martínez-Priego, G D’Auria, F Calafell, ... PLoS One 9 (6), e97379, 2014 | 18 | 2014 |
Deep divergence and genomic diversification of gut symbionts of neotropical stingless bees G Sarton-Lohéac, CG Nunes da Silva, F Mazel, G Baud, V de Bakker, ... MBio 14 (2), e03538-22, 2023 | 16 | 2023 |
Macromolecular crowding links ribosomal protein gene dosage to growth rate in Vibrio cholerae A Soler-Bistué, S Aguilar-Pierlé, M Garcia-Garcerá, ME Val, O Sismeiro, ... BMC biology 18, 1-18, 2020 | 16 | 2020 |
Acetobacteraceae in the honey bee gut comprise two distant clades with diverging metabolism and ecological niches G Bonilla-Rosso, C Paredes Juan, S Das, KM Ellegaard, O Emery, ... BioRxiv, 861260, 2019 | 16 | 2019 |
Staphylococcus prevails in the skin microbiota of long‐term immunodeficient mice M Garcia‐Garcerà, M Coscollà, K Garcia‐Etxebarria, J Martín‐Caballero, ... Environmental Microbiology 14 (8), 2087-2098, 2012 | 16 | 2012 |
Human commensal gut proteobacteria withstand type VI secretion attacks through immunity protein-independent mechanisms. Nat Commun 12: 5751 N Flaugnatti, S Isaac, LF Lemos Rocha, S Stutzmann, O Rendueles, ... | 7 | 2021 |