David Swofford
David Swofford
Research Scientist, Florida Museum of Natural History
Verified email at duke.edu
Title
Cited by
Cited by
Year
PAUP (version 3.0): phylogenetic analysis using parsimony
DL Swofford
Illinois Natural History Survey, Champaign, Ill 9, 1989
61079*1989
PAUP: phylogenetic analysis using parsimony.
DL Swofford
Mac Version 3. 1. 1.(Computer program and manual)., 1993
58722*1993
Phylogenetic Analysis Using Parsimony, PAUP* 4.0, beta version 4.0 b2
DL Swofford
Sinauer Assoc, Boston, Mass, 1999
55193*1999
PAUP* phylogenetic analysis using parsimony, version 4.0 Smithsonian Institution
DL Swofford
Washington, DC, 1998
4984*1998
BIOSYS-1: a FORTRAN program for the comprehensive analysis of electrophoretic data in population genetics and systematics
DL Swofford, RB Selander
Journal of heredity 72 (4), 281-283, 1981
4771*1981
AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
JAA Nylander, JC Wilgenbusch, DL Warren, DL Swofford
Bioinformatics 24 (4), 581-583, 2008
1898*2008
Phylogeny reconstruction. In ‘Molecular Systematics’.(Eds DM Hillis and C. Moritz.) pp. 411–501
DL Swofford, GJ Olsen
Sinauer Associates: Sunderland, Massachusetts, 1990
1683*1990
Phylogenetic analysis using parsimony (and other methods) PAUP* 4.0: Sinauer
D Swofford
Sunderland, 1999
1515*1999
Phylogenetic analysis using parsimony (and other methods) PAUP* 4.0
DL Swofford
Sinauer, Sunderland, 1999
1460*1999
Partitioning and combining data in phylogenetic analysis
JJ Bull, JP Huelsenbeck, CW Cunningham, DL Swofford, PJ Waddell
Systematic Biology 42 (3), 384-397, 1993
11201993
Reconstructing ancestral character states under Wagner parsimony
DL Swofford, WP Maddison
Mathematical biosciences 87 (2), 199-229, 1987
6361987
NEXUS: an extensible file format for systematic information
DR Maddison, DL Swofford, WP Maddison
Systematic biology 46 (4), 590-621, 1997
6071997
Phylogenetic inference
DL Swofford, GJ Olsen, PJ Waddell, DM Hillis
Molecular Systematics, second edition. Sinauer Associates, Sunderland, MA …, 1996
497*1996
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics
DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ...
Systematic biology 61 (1), 170-173, 2012
4772012
When are phylogeny estimates from molecular and morphological data incongruent?
DL Swofford
Phylogenetic analysis of DNA sequences, 295-333, 1991
4751991
Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods
DL Swofford, PJ Waddell, JP Huelsenbeck, PG Foster, PO Lewis, ...
Systematic biology 50 (4), 525-539, 2001
4462001
PAUP: Phylogenetic analysis using parsimony, ver. 3.1. 1
DL Swofford
Illinois Natural History Survey, Champaign, 1993
4431993
A compound Poisson process for relaxing the molecular clock
JP Huelsenbeck, B Larget, D Swofford
Genetics 154 (4), 1879-1892, 2000
3982000
Inferring evolutionary trees with PAUP
JC Wilgenbusch, D Swofford
Current protocols in bioinformatics, 6.4. 1-6.4. 28, 2003
3612003
Are guinea pigs rodents? The importance of adequate models in molecular phylogenetics
J Sullivan, DL Swofford
Journal of Mammalian Evolution 4 (2), 77-86, 1997
3571997
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