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Erik Holmqvist
Erik Holmqvist
Assistant Professor, Uppsala University
Verified email at icm.uu.se
Title
Cited by
Cited by
Year
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA
KI Udekwu, F Darfeuille, J Vogel, J Reimegård, E Holmqvist, EGH Wagner
Genes & development 19 (19), 2355-2366, 2005
3732005
Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo
E Holmqvist, PR Wright, L Li, T Bischler, L Barquist, R Reinhardt, ...
The EMBO journal 35 (9), 991-1011, 2016
2692016
Grad-seq guides the discovery of ProQ as a major small RNA-binding protein
A Smirnov, KU Förstner, E Holmqvist, A Otto, R Günster, D Becher, ...
Proceedings of the National Academy of Sciences 113 (41), 11591-11596, 2016
2402016
Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis
E Holmqvist, J Reimegård, M Sterk, N Grantcharova, U Römling, ...
The EMBO journal 29 (11), 1840-1850, 2010
2042010
RNA-binding proteins in bacteria
E Holmqvist, J Vogel
Nature Reviews Microbiology 16 (10), 601-615, 2018
1392018
Impact of bacterial sRNAs in stress responses
E Holmqvist, EGH Wagner
Biochemical Society Transactions 45 (6), 1203-1212, 2017
1012017
Global maps of ProQ binding in vivo reveal target recognition via RNA structure and stability control at mRNA 3′ ends
E Holmqvist, L Li, T Bischler, L Barquist, J Vogel
Molecular cell 70 (5), 971-982. e6, 2018
992018
RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE
C Michaux, E Holmqvist, E Vasicek, M Sharan, L Barquist, ...
Proceedings of the National Academy of Sciences 114 (26), 6824-6829, 2017
902017
A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp
E Holmqvist, C Unoson, J Reimegård, EGH Wagner
Molecular microbiology 84 (3), 414-427, 2012
752012
Sensory Ataxic Neuropathy in Golden Retriever Dogs Is Caused by a Deletion in the Mitochondrial tRNATyr Gene
I Baranowska, KH Jäderlund, I Nennesmo, E Holmqvist, N Heidrich, ...
PLoS genetics 5 (5), e1000499, 2009
462009
Structure of the Escherichia coli ProQ RNA-binding protein
GM Gonzalez, SW Hardwick, SL Maslen, JM Skehel, E Holmqvist, J Vogel, ...
Rna 23 (5), 696-711, 2017
442017
Massive functional mapping of a 5′-UTR by saturation mutagenesis, phenotypic sorting and deep sequencing
E Holmqvist, J Reimegård, EGH Wagner
Nucleic acids research 41 (12), e122-e122, 2013
402013
Hfq‐dependent mRNA unfolding promotes sRNA‐based inhibition of translation
M Hoekzema, C Romilly, E Holmqvist, EGH Wagner
The EMBO journal 38 (7), e101199, 2019
352019
A small RNA serving both the Hfq and CsrA regulons
E Holmqvist, J Vogel
Genes & development 27 (10), 1073-1078, 2013
302013
RNA-binding activity and regulatory functions of the emerging sRNA-binding protein ProQ
E Holmqvist, S Berggren, A Rizvanovic
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1863 (9), 194596, 2020
172020
The Small Toxic Salmonella Protein TimP Targets the Cytoplasmic Membrane and Is Repressed by the Small RNA TimR
L Andresen, Y Martínez-Burgo, J Nilsson Zangelin, A Rizvanovic, ...
MBio 11 (6), e01659-20, 2020
72020
CLIP-Seq in bacteria: global recognition patterns of bacterial RNA-binding proteins
L Andresen, E Holmqvist
Methods in Enzymology 612, 127-145, 2018
52018
CsrA enters Hfq's territory: Regulation of a base‐pairing small RNA
TS Stenum, E Holmqvist
Molecular Microbiology 117 (1), 4-9, 2022
42022
Small RNAs OmrA and OmrB promote class III flagellar gene expression by inhibiting the synthesis of anti-Sigma factor FlgM
C Romilly, M Hoekzema, E Holmqvist, EGH Wagner
RNA biology 17 (6), 872-880, 2020
42020
Saturation mutagenesis charts the functional landscape of Salmonella ProQ and reveals a gene regulatory function of its C-terminal domain
A Rizvanovic, J Kjellin, F Söderbom, E Holmqvist
Nucleic acids research 49 (17), 9992-10006, 2021
32021
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