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Allen Rodrigo
Allen Rodrigo
The School of Biological Sciences, The University of Auckland
Verified email at auckland.ac.nz
Title
Cited by
Cited by
Year
Likelihood-based tests of topologies in phylogenetics
N Goldman, JP Anderson, AG Rodrigo
Systematic biology 49 (4), 652-670, 2000
12332000
Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data
AJ Drummond, GK Nicholls, AG Rodrigo, W Solomon
Genetics 161 (3), 1307-1320, 2002
11762002
Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection
RAJ Shankarappa, JB Margolick, SJ Gange, AG Rodrigo, D Upchurch, ...
Journal of virology 73 (12), 10489-10502, 1999
11671999
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges
S Schmitt, P Tsai, J Bell, J Fromont, M Ilan, N Lindquist, T Perez, ...
The ISME Journal 6 (3), 564-576, 2012
5852012
Time‐dependent rates of molecular evolution
SYW Ho, R Lanfear, L Bromham, MJ Phillips, J Soubrier, AG Rodrigo, ...
Molecular ecology 20 (15), 3087-3101, 2011
5592011
Measurably evolving populations
AJ Drummond, OG Pybus, A Rambaut, R Forsberg, AG Rodrigo
Trends in ecology & evolution 18 (9), 481-488, 2003
4682003
Description of Caldicellulosiruptor saccharolyticus gen. nov., sp. nov: An obligately anaerobic, extremely thermophilic, cellulolytic bacterium
FA Rainey, AM Donnison, PH Janssen, D Saul, A Rodrigo, PL Bergquist, ...
FEMS microbiology letters 120 (3), 263-266, 1994
2501994
Transition between stochastic evolution and deterministic evolution in the presence of selection: general theory and application to virology
IM Rouzine, A Rodrigo, JM Coffin
Microbiology and molecular biology reviews 65 (1), 151-185, 2001
2182001
HIV quasispecies and resampling
SL Liu, AG Rodrigo, R Shankarappa, GH Learn, L Hsu, O Davidov, ...
Science 273 (5274), 415-416, 1996
2121996
Genetic diversity of feline immunodeficiency virus: dual infection, recombination, and distinct evolutionary rates among envelope sequence clades
MH Bachmann, C Mathiason-Dubard, GH Learn, AG Rodrigo, DL Sodora, ...
Journal of virology 71 (6), 4241-4253, 1997
1951997
Pervasive Genomic Recombination of HIV-1 in Vivo
D Shriner, AG Rodrigo, DC Nickle, JI Mullins
Genetics 167 (4), 1573-1583, 2004
1902004
Genetic subtyping of human immunodeficiency virus using a heteroduplex mobility assay.
EL Delwart, B Herring, AG Rodrigo, JI Mullins
Genome Research 4 (5), S202-S216, 1995
1901995
Modeling the site-specific variation of selection patterns along lineages
S Guindon, AG Rodrigo, KA Dyer, JP Huelsenbeck
Proceedings of the National Academy of Sciences 101 (35), 12957-12962, 2004
1842004
Consensus and ancestral state HIV vaccines
DC Nickle, MA Jensen, GS Gottlieb, D Shriner, GH Learn, AG Rodrigo, ...
Science 299 (5612), 1515-1518, 2003
1832003
Coalescent Approaches to HIV Population Genetics
AG Rodrigo, J Felsenstein
The Evolution of HIV, 233-274, 1999
1811999
DNA surveillance: web-based molecular identification of whales, dolphins, and porpoises
HA Ross, GM Lento, ML Dalebout, M Goode, G Ewing, P McLaren, ...
Journal of Heredity 94 (2), 111-114, 2003
1772003
Ultrafast Evolution and Loss of CRISPRs Following a Host Shift in a Novel Wildlife Pathogen, Mycoplasma gallisepticum
NF Delaney, S Balenger, C Bonneaud, CJ Marx, GE Hill, ...
PLoS genetics 8 (2), e1002511, 2012
1712012
Evolution of envelope sequences from the genital tract and peripheral blood of women infected with clade A human immunodeficiency virus type 1
M Poss, AG Rodrigo, JJ Gosink, GH Learn, D de Vange Panteleeff, ...
Journal of virology 72 (10), 8240-8251, 1998
1691998
Quantitation of target molecules from polymerase chain reaction-based limiting dilution assays
AG RODRIGO, PC GORACKE, K ROWHANIAN, JI MULLINS
AIDS research and human retroviruses 13 (9), 737-742, 1997
1651997
A randomisation test of the null hypothesis that two cladograms are sample estimates of a parametric phylogenetic tree
AG Rodrigo, M Kelly-Borges, PR Bergquist, PL Bergquist
New Zealand Journal of Botany 31 (3), 257-268, 1993
1601993
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Articles 1–20