Sam Griffiths-Jones - Google Scholar

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Co-authors

Alex BatemanHead of Protein Sequence Resources, EMBL-EBIVerified email at ebi.ac.uk
Sean R. EddyHHMI & Harvard UniversityVerified email at fas.harvard.edu
Anton EnrightGroup Leader, Department of Pathology, University of CambridgeVerified email at cam.ac.uk
Robert D. FinnSequence Families Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SD, UKVerified email at ebi.ac.uk
Erik SonnhammerStockholm Bioinformatics Centre, DBB, Stockholm University, Science for Life LaboratoryVerified email at scilifelab.se
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
Matthew RonshaugenUniversity of ManchesterVerified email at manchester.ac.uk
Simon MoxonAssociate Professor of Bioinformatics, University of East AngliaVerified email at uea.ac.uk
Harpreet SainiBioinformatician, European Bioinformatics InstituteVerified email at ebi.ac.uk
Stijn van DongenSenior Software Developer, Wellcome Sanger Institute, Cambridge UKVerified email at sanger.ac.uk
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Antonio MarcoLecturer, University of EssexVerified email at essex.ac.uk
Maria NinovaCalifornia Institute of TechnologyVerified email at caltech.edu
James C. CarringtonDonald Danforth Plant Science CenterVerified email at danforthcenter.org
Bonnie BartelProfessor, BioSciences, Biochemistry and Cell Biology, Rice UniversityVerified email at rice.edu
David BartelProfessor of Biology, HHMI, MIT, Whitehead InstituteVerified email at wi.mit.edu
Ewan BirneyDirector, EMBL-EBIVerified email at ebi.ac.uk
Lachlan CoinPeter Doherty Institute for Infection and Immunity and University of Melbourne Centre for CancerVerified email at unimelb.edu.au
Corin YeatsImperial College London, Sanger InstituteVerified email at imperial.ac.uk
David StudholmeUniversity of ExeterVerified email at exeter.ac.uk

Sam Griffiths-Jones

Faculty of Biology, Medicine and Health. University of Manchester

Verified email at manchester.ac.uk - Homepage

Computational Biology Genomics RNA microRNA


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miRBase: microRNA sequences, targets and gene nomenclature S Griffiths-Jones, RJ Grocock, S Van Dongen, A Bateman, AJ Enright Nucleic acids research 34 (suppl_1), D140-D144, 2006	4641	2006
miRBase: tools for microRNA genomics S Griffiths-Jones, HK Saini, S van Dongen, AJ Enright Nucleic acids research 36 (suppl_1), D154-D158, 2007	4588	2007
miRBase: annotating high confidence microRNAs using deep sequencing data A Kozomara, S Griffiths-Jones Nucleic acids research 42 (D1), D68-D73, 2014	4200	2014
miRBase: integrating microRNA annotation and deep-sequencing data A Kozomara, S Griffiths-Jones Nucleic acids research 39 (suppl 1), D152-D157, 2011	3722	2011
The Pfam protein families database A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ... Nucleic acids research 32 (suppl_1), D138-D141, 2004	3617	2004
The microRNA registry S Griffiths‐Jones Nucleic acids research 32 (suppl_1), D109-D111, 2004	2631	2004
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus Nature 438, 1151-1156, 2005	2541*	2005
The Pfam protein families database A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ... Nucleic acids research 30 (1), 276-280, 2002	2505	2002
Pfam: clans, web tools and services RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ... Nucleic acids research 34 (suppl_1), D247-D251, 2006	2388	2006
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ... Nature 432 (7018), 695-716, 2004	2334	2004
Identification of mammalian microRNA host genes and transcription units A Rodriguez, S Griffiths-Jones, JL Ashurst, A Bradley Genome research 14 (10a), 1902-1910, 2004	2301	2004
A uniform system for microRNA annotation V Ambros, B Bartel, DP Bartel, CB Burge, JC Carrington, X Chen, ... Rna 9 (3), 277-279, 2003	2070	2003
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-218, 2007	1899*	2007
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus (vol 438, pg 1151, 2005) WC Nierman, A Pain, MJ Anderson, JR Wortman, HS Kim, J Arroyo, ... Nature 439 (7075), 502-502, 2006	1370*	2006
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae JE Galagan, SE Calvo, C Cuomo, LJ Ma, JR Wortman, S Batzoglou, ... Nature 438 (7071), 1105-1115, 2005	1366	2005
Rfam: an RNA family database S Griffiths-Jones, A Bateman, M Marshall, A Khanna, SR Eddy Nucleic acids research 31 (1), 439-441, 2003	1342	2003
Rfam: annotating non-coding RNAs in complete genomes S Griffiths-Jones, S Moxon, M Marshall, A Khanna, SR Eddy, A Bateman Nucleic acids research 33 (suppl_1), D121-D124, 2005	1340	2005
Criteria for annotation of plant MicroRNAs BC Meyers, MJ Axtell, B Bartel, DP Bartel, D Baulcombe, JL Bowman, ... The Plant Cell 20 (12), 3186-3190, 2008	1081	2008
The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics LD Stein, Z Bao, D Blasiar, T Blumenthal, MR Brent, N Chen, A Chinwalla, ... PLoS biology 1 (2), e45, 2003	977	2003
The InterPro Database, 2003 brings increased coverage and new features NJ Mulder, R Apweiler, TK Attwood, A Bairoch, D Barrell, A Bateman, ... Nucleic acids research 31 (1), 315-318, 2003	838	2003

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