David Penny
David Penny
Professor of theoretical Biology, Massey University
Verified email at
Cited by
Cited by
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
W Martin, T Rujan, E Richly, A Hansen, S Cornelsen, T Lins, D Leister, ...
Proceedings of the National Academy of Sciences 99 (19), 12246-12251, 2002
Recovering evolutionary trees under a more realistic model of sequence evolution.
PJ Lockhart, MA Steel, MD Hendy, D Penny
Molecular biology and evolution 11 (4), 605-612, 1994
A framework for the quantitative study of evolutionary trees
MD Hendy, D Penny
Systematic zoology 38 (4), 297-309, 1989
The modern molecular clock
L Bromham, D Penny
Nature Reviews Genetics 4 (3), 216-224, 2003
Branch and bound algorithms to determine minimal evolutionary trees
MD Hendy, D Penny
Mathematical biosciences 59 (2), 277-290, 1982
Mass survival of birds across the Cretaceous-Tertiary boundary: molecular evidence
A Cooper, D Penny
Science 275 (5303), 1109-1113, 1997
From gene trees to organismal phylogeny in prokaryotes: the case of the γ-Proteobacteria
E Lerat, V Daubin, NA Moran
PLoS biology 1 (1), e19, 2003
Genome-scale phylogeny and the detection of systematic biases
MJ Phillips, F Delsuc, D Penny
Molecular biology and evolution 21 (7), 1455-1458, 2004
Distributions of tree comparison metrics—some new results
MA Steel, D Penny
Systematic biology 42 (2), 126-141, 1993
A genome phylogeny for mitochondria among α-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes
C Esser, N Ahmadinejad, C Wiegand, C Rotte, F Sebastiani, ...
Molecular biology and evolution 21 (9), 1643-1660, 2004
Parsimony, likelihood, and the role of models in molecular phylogenetics
M Steel, D Penny
Molecular biology and evolution 17 (6), 839-850, 2000
The use of tree comparison metrics
D Penny, MD Hendy
Systematic Zoology 34 (1), 75-82, 1985
Modern humans did not admix with Neanderthals during their range expansion into Europe
M Currat, L Excoffier
PLoS biology 2 (12), e421, 2004
The path from the RNA world
AM Poole, DC Jeffares, D Penny
Journal of Molecular Evolution 46, 1-17, 1998
Relics from the RNA world
DC Jeffares, AM Poole, D Penny
Journal of molecular evolution 46, 18-36, 1998
Early penguin fossils, plus mitochondrial genomes, calibrate avian evolution
KE Slack, CM Jones, T Ando, GL Harrison, RE Fordyce, U Arnason, ...
Molecular biology and evolution 23 (6), 1144-1155, 2006
Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA.
RE Hickson, C Simon, A Cooper, GS Spicer, J Sullivan, D Penny
Molecular biology and evolution 13 (1), 150-169, 1996
The biology of intron gain and loss
DC Jeffares, T Mourier, D Penny
TRENDS in Genetics 22 (1), 16-22, 2006
The root of the mammalian tree inferred from whole mitochondrial genomes
MJ Phillips, D Penny
Molecular phylogenetics and evolution 28 (2), 171-185, 2003
Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences
D Penny, LR Foulds, MD Hendy
Nature 297 (5863), 197-200, 1982
The system can't perform the operation now. Try again later.
Articles 1–20