David Penny
David Penny
Professor of theoretical Biology, Massey University
Verified email at massey.ac.nz
TitleCited byYear
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
W Martin, T Rujan, E Richly, A Hansen, S Cornelsen, T Lins, D Leister, ...
Proceedings of the National Academy of Sciences 99 (19), 12246-12251, 2002
11782002
Recovering evolutionary trees under a more realistic model of sequence evolution.
PJ Lockhart, MA Steel, MD Hendy, D Penny
Molecular biology and evolution 11 (4), 605-612, 1994
10451994
A framework for the quantitative study of evolutionary trees
MD Hendy, D Penny
Systematic zoology 38 (4), 297-309, 1989
8421989
Molecular quasi-species
M Eigen, J McCaskill, P Schuster
The Journal of Physical Chemistry 92 (24), 6881-6891, 1988
6551988
Branch and bound algorithms to determine minimal evolutionary trees
MD Hendy, D Penny
Mathematical Biosciences 59 (2), 277-290, 1982
6411982
The modern molecular clock
L Bromham, D Penny
Nature Reviews Genetics 4 (3), 216, 2003
6002003
Mass survival of birds across the Cretaceous-Tertiary boundary: molecular evidence
A Cooper, D Penny
Science 275 (5303), 1109-1113, 1997
5171997
Genome-scale phylogeny and the detection of systematic biases
MJ Phillips, F Delsuc, D Penny
Molecular biology and evolution 21 (7), 1455-1458, 2004
3922004
Hexapod origins: monophyletic or paraphyletic?
F Nardi, G Spinsanti, JL Boore, A Carapelli, R Dallai, F Frati
Science 299 (5614), 1887-1889, 2003
3722003
The use of tree comparison metrics
D Penny, MD Hendy
Systematic Zoology 34 (1), 75-82, 1985
3461985
A genome phylogeny for mitochondria among α-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes
C Esser, N Ahmadinejad, C Wiegand, C Rotte, F Sebastiani, ...
Molecular Biology and Evolution 21 (9), 1643-1660, 2004
3382004
Parsimony, likelihood, and the role of models in molecular phylogenetics
M Steel, D Penny
Molecular biology and evolution 17 (6), 839-850, 2000
3282000
Distributions of tree comparison metrics—some new results
MA Steel, D Penny
Systematic biology 42 (2), 126-141, 1993
3141993
The path from the RNA world
AM Poole, DC Jeffares, D Penny
Journal of Molecular Evolution 46 (1), 1-17, 1998
2871998
Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA.
RE Hickson, C Simon, A Cooper, GS Spicer, J Sullivan, D Penny
Molecular biology and evolution 13 (1), 150-169, 1996
2851996
Relics from the RNA world
DC Jeffares, AM Poole, D Penny
Journal of Molecular Evolution 46 (1), 18-36, 1998
2781998
Early penguin fossils, plus mitochondrial genomes, calibrate avian evolution
KE Slack, CM Jones, T Ando, GL Harrison, RE Fordyce, U Arnason, ...
Molecular biology and evolution 23 (6), 1144-1155, 2006
2652006
The biology of intron gain and loss
DC Jeffares, T Mourier, D Penny
TRENDS in Genetics 22 (1), 16-22, 2006
2652006
Complex spliceosomal organization ancestral to extant eukaryotes
L Collins, D Penny
Molecular biology and evolution 22 (4), 1053-1066, 2005
2532005
The root of the mammalian tree inferred from whole mitochondrial genomes
MJ Phillips, D Penny
Molecular phylogenetics and evolution 28 (2), 171-185, 2003
2442003
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