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David Penny
David Penny
Professor of theoretical Biology, Massey University
Verified email at massey.ac.nz
Title
Cited by
Cited by
Year
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
W Martin, T Rujan, E Richly, A Hansen, S Cornelsen, T Lins, D Leister, ...
Proceedings of the National Academy of Sciences 99 (19), 12246-12251, 2002
13152002
Recovering evolutionary trees under a more realistic model of sequence evolution.
PJ Lockhart, MA Steel, MD Hendy, D Penny
Molecular biology and evolution 11 (4), 605-612, 1994
11191994
A framework for the quantitative study of evolutionary trees
MD Hendy, D Penny
Systematic zoology 38 (4), 297-309, 1989
9361989
Branch and bound algorithms to determine minimal evolutionary trees
MD Hendy, D Penny
Mathematical Biosciences 59 (2), 277-290, 1982
6951982
The modern molecular clock
L Bromham, D Penny
Nature Reviews Genetics 4 (3), 216-224, 2003
6892003
Mass survival of birds across the Cretaceous-Tertiary boundary: molecular evidence
A Cooper, D Penny
Science 275 (5303), 1109-1113, 1997
5471997
From gene trees to organismal phylogeny in prokaryotes: the case of the γ-Proteobacteria
E Lerat, V Daubin, NA Moran, D Penny
PLoS biology 1 (1), e19, 2003
5062003
Genome-scale phylogeny and the detection of systematic biases
MJ Phillips, F Delsuc, D Penny
Molecular biology and evolution 21 (7), 1455-1458, 2004
4402004
The use of tree comparison metrics
D Penny, MD Hendy
Systematic Zoology 34 (1), 75-82, 1985
3761985
A genome phylogeny for mitochondria among α-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes
C Esser, N Ahmadinejad, C Wiegand, C Rotte, F Sebastiani, ...
Molecular biology and evolution 21 (9), 1643-1660, 2004
3752004
Parsimony, likelihood, and the role of models in molecular phylogenetics
M Steel, D Penny
Molecular biology and evolution 17 (6), 839-850, 2000
3702000
Distributions of tree comparison metrics—some new results
MA Steel, D Penny
Systematic biology 42 (2), 126-141, 1993
3591993
The path from the RNA world
AM Poole, DC Jeffares, D Penny
Journal of Molecular Evolution 46 (1), 1-17, 1998
3251998
Modern humans did not admix with Neanderthals during their range expansion into Europe
M Currat, L Excoffier, D Penny
PLoS biology 2 (12), e421, 2004
3242004
Relics from the RNA world
DC Jeffares, AM Poole, D Penny
Journal of molecular evolution 46 (1), 18-36, 1998
3161998
Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA.
RE Hickson, C Simon, A Cooper, GS Spicer, J Sullivan, D Penny
Molecular biology and evolution 13 (1), 150-169, 1996
3071996
Early penguin fossils, plus mitochondrial genomes, calibrate avian evolution
KE Slack, CM Jones, T Ando, GL Harrison, RE Fordyce, U Arnason, ...
Molecular biology and evolution 23 (6), 1144-1155, 2006
3012006
The biology of intron gain and loss
DC Jeffares, T Mourier, D Penny
TRENDS in Genetics 22 (1), 16-22, 2006
2952006
The root of the mammalian tree inferred from whole mitochondrial genomes
MJ Phillips, D Penny
Molecular phylogenetics and evolution 28 (2), 171-185, 2003
2772003
Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences
D Penny, LR Foulds, MD Hendy
Nature 297 (5863), 197-200, 1982
2601982
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