Julian Parkhill
Title
Cited by
Cited by
Year
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
ST Cole, R Brosch, J Parkhill, T Garnier, C Churcher, D Harris, SV Gordon, ...
Nature 393 (6685), 537-544, 1998
87161998
A human gut microbial gene catalogue established by metagenomic sequencing
J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ...
nature 464 (7285), 59-65, 2010
80702010
Enterotypes of the human gut microbiome
M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ...
nature 473 (7346), 174-180, 2011
49702011
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3 (2)
SD Bentley, KF Chater, AM Cerdeńo-Tárraga, GL Challis, NR Thomson, ...
Nature 417 (6885), 141-147, 2002
33842002
Artemis: sequence visualization and annotation
K Rutherford, J Parkhill, J Crook, T Horsnell, P Rice, MA Rajandream, ...
Bioinformatics 16 (10), 944-945, 2000
31802000
Richness of human gut microbiome correlates with metabolic markers
E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ...
Nature 500 (7464), 541-546, 2013
24872013
The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences
J Parkhill, BW Wren, K Mungall, JM Ketley, C Churcher, D Basham, ...
Nature 403 (6770), 665-668, 2000
20672000
Massive gene decay in the leprosy bacillus
ST Cole, K Eiglmeier, J Parkhill, KD James, NR Thomson, PR Wheeler, ...
Nature 409 (6823), 1007-1011, 2001
19272001
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
SJ Salter, MJ Cox, EM Turek, ST Calus, WO Cookson, MF Moffatt, ...
BMC biology 12 (1), 87, 2014
15672014
ACT: the Artemis comparison tool
TJ Carver, KM Rutherford, M Berriman, MA Rajandream, BG Barrell, ...
Bioinformatics 21 (16), 3422-3423, 2005
14882005
Genome sequence of Yersinia pestis, the causative agent of plague
J Parkhill, BW Wren, NR Thomson, RW Titball, MTG Holden, MB Prentice, ...
Nature 413 (6855), 523-527, 2001
13672001
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
J Parkhill, G Dougan, KD James, NR Thomson, D Pickard, J Wain, ...
Nature 413 (6858), 848-852, 2001
12862001
Roary: rapid large-scale prokaryote pan genome analysis
AJ Page, CA Cummins, M Hunt, VK Wong, S Reuter, MTG Holden, ...
Bioinformatics 31 (22), 3691-3693, 2015
12482015
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
AW Walker, J Ince, SH Duncan, LM Webster, G Holtrop, X Ze, D Brown, ...
The ISME journal 5 (2), 220-230, 2011
12482011
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
11422008
The complete genome sequence of Mycobacterium bovis
T Garnier, K Eiglmeier, JC Camus, N Medina, H Mansoor, M Pryor, ...
Proceedings of the National Academy of Sciences 100 (13), 7877-7882, 2003
11082003
Evolution of MRSA during hospital transmission and intercontinental spread
SR Harris, EJ Feil, MTG Holden, MA Quail, EK Nickerson, N Chantratita, ...
Science 327 (5964), 469-474, 2010
10722010
Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance
MTG Holden, EJ Feil, JA Lindsay, SJ Peacock, NPJ Day, MC Enright, ...
Proceedings of the National Academy of Sciences 101 (26), 9786-9791, 2004
10422004
The genome of the blood fluke Schistosoma mansoni
M Berriman, BJ Haas, PT LoVerde, RA Wilson, GP Dillon, GC Cerqueira, ...
Nature 460 (7253), 352-358, 2009
10082009
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
J Parkhill, M Sebaihia, A Preston, LD Murphy, N Thomson, DE Harris, ...
Nature genetics 35 (1), 32-40, 2003
9842003
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Articles 1–20