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Andrew Dopheide
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Methods for the extraction, storage, amplification and sequencing of DNA from environmental samples
G Lear, I Dickie, J Banks, S Boyer, HL Buckley, TR Buckley, ...
New Zealand Journal of Ecology 42 (1), 10-50A, 2018
1882018
Evaluating a multigene environmental DNA approach for biodiversity assessment
AJ Drummond, RD Newcomb, TR Buckley, D Xie, A Dopheide, ...
GigaScience 4 (1), s13742-015-0086-1, 2015
1792015
Molecular characterization of ciliate diversity in stream biofilms
A Dopheide, G Lear, R Stott, G Lewis
Applied and Environmental Microbiology 74 (6), 1740-1747, 2008
1102008
Metal concentrations in stream biofilm and sediments and their potential to explain biofilm microbial community structure
PY Ancion, G Lear, A Dopheide, GD Lewis
Environmental pollution 173, 117-124, 2013
1082013
Preferential feeding by the ciliates Chilodonella and Tetrahymena spp. and effects of these protozoa on bacterial biofilm structure and composition
A Dopheide, G Lear, R Stott, G Lewis
Applied and environmental microbiology 77 (13), 4564-4572, 2011
792011
Relative diversity and community structure of ciliates in stream biofilms according to molecular and microscopy methods
A Dopheide, G Lear, R Stott, G Lewis
Applied and Environmental Microbiology 75 (16), 5261-5272, 2009
782009
Impacts of DNA extraction and PCR on DNA metabarcoding estimates of soil biodiversity
A Dopheide, D Xie, TR Buckley, AJ Drummond, RD Newcomb
Methods in Ecology and Evolution 10 (1), 120-133, 2019
732019
DNA metabarcoding as a tool for invertebrate community monitoring: a case study comparison with conventional techniques
C Watts, A Dopheide, R Holdaway, C Davis, J Wood, D Thornburrow, ...
Austral Entomology 58 (3), 675-686, 2019
582019
Estimating the biodiversity of terrestrial invertebrates on a forested island using DNA barcodes and metabarcoding data
A Dopheide, LK Tooman, S Grosser, B Agabiti, B Rhode, D Xie, ...
Ecological Applications 29 (4), e01877, 2019
532019
A comparison of bacterial, ciliate and macroinvertebrate indicators of stream ecological health
G Lear, A Dopheide, P Ancion, GD Lewis
Aquatic Ecology 45 (4), 517-527, 2011
502011
Functional gene composition, diversity and redundancy in microbial stream biofilm communities
A Dopheide, G Lear, Z He, J Zhou, GD Lewis
PLoS One 10 (4), e0123179, 2015
492015
Biofilms in freshwater: their importance for the maintenance and monitoring of freshwater health
G Lear, A Dopheide, PY Ancion, K Roberts, V Washington, J Smith, ...
Microbial Biofilms: Current research and applications, 129-151, 2012
452012
Rarity is a more reliable indicator of land-use impacts on soil invertebrate communities than other diversity metrics
A Dopheide, A Makiola, KH Orwin, RJ Holdaway, JR Wood, IA Dickie
Elife 9, e52787, 2020
242020
Depth-structuring of multi-kingdom soil communities in agricultural pastures
A Dopheide, C Davis, J Nuņez, G Rogers, D Whitehead, GA Grelet
FEMS Microbiology Ecology 97 (12), fiab156, 2021
52021
Mineralizable nitrogen and denitrification enzyme activity drive nitrate concentrations in well-drained stony subsoil under lucerne (Medicago sativa L.)
J Nunez, KH Orwin, GYK Moinet, SL Graham, GND Rogers, MH Turnbull, ...
Applied Soil Ecology 176, 104499, 2022
22022
The mycorrhizal communities of Lophomyrtus bullata Burret (Myrtaceae) within three natural forest associations of New Zealand
M Ford
Masters Thesis-University of Auckland, 2021
22021
Labile carbon inputs support the recovery of bacterial communities, but not fungal communities, from a simulated bovine urine event
A Dopheide, C Davis, SA Wakelin, D Whitehead, GA Grelet
Biology and Fertility of Soils 59 (3), 333-349, 2023
12023
Labile carbon inputs support the recovery of prokaryotic communities, but not fungal communities, from a simulated bovine urine event.
A Dopheide, C Davis, SA Wakelin, D Whitehead, GA Grelet
2022
Fast‐tracking bespoke DNA reference database generation from museum collections for biomonitoring and conservation
A Dopheide, T Brav‐Cubitt, A Podolyan, RAB Leschen, D Ward, ...
Molecular Ecology Resources, 2022
2022
DNA meta-barcoding and molecular ecology in a forested island ecosystem
A Dopheide
PhD Thesis-University of Auckland, 2016
2016
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Articles 1–20