Bui Quang Minh (Minh Bùi)
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IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies
LT Nguyen, HA Schmidt, A von Haeseler, BQ Minh
Molecular biology and evolution 32 (1), 268-274, 2015
ModelFinder: fast model selection for accurate phylogenetic estimates
S Kalyaanamoorthy, BQ Minh, TKF Wong, A Von Haeseler, LS Jermiin
Nature methods 14 (6), 587-589, 2017
IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era
BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ...
Molecular biology and evolution 37 (5), 1530-1534, 2020
UFBoot2: improving the ultrafast bootstrap approximation
DT Hoang, O Chernomor, A Von Haeseler, BQ Minh, LS Vinh
Molecular biology and evolution 35 (2), 518-522, 2018
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
J Trifinopoulos, LT Nguyen, A von Haeseler, BQ Minh
Nucleic acids research 44 (W1), W232-W235, 2016
Ultrafast approximation for phylogenetic bootstrap
BQ Minh, MAT Nguyen, A Von Haeseler
Molecular biology and evolution 30 (5), 1188-1195, 2013
Terrace aware data structure for phylogenomic inference from supermatrices
O Chernomor, A Von Haeseler, BQ Minh
Systematic biology 65 (6), 997-1008, 2016
New methods to calculate concordance factors for phylogenomic datasets
BQ Minh, MW Hahn, R Lanfear
Molecular biology and evolution 37 (9), 2727-2733, 2020
Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
HC Wang, BQ Minh, E Susko, AJ Roger
Systematic biology 67 (2), 216-235, 2018
Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista
F Burki, M Kaplan, DV Tikhonenkov, V Zlatogursky, BQ Minh, ...
Proceedings of the Royal Society B: Biological Sciences 283 (1823), 20152802, 2016
Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes
RJE Alves, BQ Minh, T Urich, A von Haeseler, C Schleper
Nature communications 9 (1), 1517, 2018
MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation
DT Hoang, LS Vinh, T Flouri, A Stamatakis, A von Haeseler, BQ Minh
BMC evolutionary biology 18, 1-11, 2018
Distribution and phylogeny of light-oxygen-voltage-blue-light-signaling proteins in the three kingdoms of life
U Krauss, BQ Minh, A Losi, W Gärtner, T Eggert, A von Haeseler, ...
Journal of bacteriology 191 (23), 7234-7242, 2009
GHOST: recovering historical signal from heterotachously evolved sequence alignments
SM Crotty, BQ Minh, NG Bean, BR Holland, J Tuke, LS Jermiin, ...
Systematic biology 69 (2), 249-264, 2020
Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects
E Dell’Ampio, K Meusemann, NU Szucsich, RS Peters, B Meyer, J Borner, ...
Molecular biology and evolution 31 (1), 239-249, 2014
The prevalence and impact of model violations in phylogenetic analysis
S Naser-Khdour, BQ Minh, W Zhang, EA Stone, R Lanfear
Genome biology and evolution 11 (12), 3341-3352, 2019
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies
BQ Minh, LS Vinh, A Von Haeseler, HA Schmidt
Bioinformatics 21 (19), 3794-3796, 2005
Want to track pandemic variants faster? Fix the bioinformatics bottleneck
EB Hodcroft, N De Maio, R Lanfear, DR MacCannell, BQ Minh, ...
Nature 591 (7848), 30-33, 2021
Undinarchaeota illuminate DPANN phylogeny and the impact of gene transfer on archaeal evolution
N Dombrowski, TA Williams, J Sun, BJ Woodcroft, JH Lee, BQ Minh, ...
Nature Communications 11 (1), 3939, 2020
Reversible polymorphism-aware phylogenetic models and their application to tree inference
D Schrempf, BQ Minh, N De Maio, A von Haeseler, C Kosiol
Journal of theoretical biology 407, 362-370, 2016
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Articles 1–20