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José S. L. Patané
José S. L. Patané
Bioinformatician - Lab. Especial de Ciclo Celular, Instituto Butantan
Verified email at butantan.gov.br
Title
Cited by
Cited by
Year
Best practices for justifying fossil calibrations
JF Parham, PCJ Donoghue, CJ Bell, TD Calway, JJ Head, PA Holroyd, ...
Systematic Biology 61 (2), 346-359, 2012
6932012
Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota)
MM Teixeira, LF Moreno, BJ Stielow, A Muszewska, M Hainaut, ...
Studies in mycology 86, 1-28, 2017
1862017
Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity
AR Schwartz, N Potnis, S Timilsina, M Wilson, J Patané, J Martins Jr, ...
Frontiers in Microbiology 6, 535, 2015
1662015
Worldwide Phylogenetic Distributions and Population Dynamics of the Genus Histoplasma
MM Teixeira, JSL Patané, ML Taylor, BL Gómez, RC Theodoro, ...
PLoS neglected tropical diseases 10 (6), e0004732, 2016
1302016
Temporal and spatial diversification of Pteroglossus aracaris (Aves: Ramphastidae) in the Neotropics: constant rate of diversification does not support an increase in radiation …
S Patel, JD Weckstein, JSL Patané, JM Bates, A Aleixo
Molecular Phylogenetics and Evolution 58 (1), 105-115, 2011
812011
Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil
M Giovanetti, SN Slavov, V Fonseca, E Wilkinson, H Tegally, JSL Patané, ...
Nature Microbiology 7 (9), 1490-1500, 2022
742022
The fossil calibration database—a new resource for divergence dating
DT Ksepka, JF Parham, JF Allman, MJ Benton, MT Carrano, KA Cranston, ...
Systematic Biology 64 (5), 853-859, 2015
642015
Evolutionary history of Ramphastos toucans: molecular phylogenetics, temporal diversification, and biogeography
JSL Patané, JD Weckstein, A Aleixo, JM Bates
Molecular Phylogenetics and Evolution 53 (3), 923-934, 2009
642009
Global Distribution and Evolution of Mycobacterium bovis Lineages
CK Zimpel, JSL Patané, ACP Guedes, RF de Souza, TT Silva-Pereira, ...
Frontiers in microbiology 11, 843, 2020
582020
Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses
JSL Patané, J Martins, LT Rangel, J Belasque, LA Digiampietri, ...
BMC genomics 20, 1-23, 2019
452019
Biogeography and spatio-temporal diversification of Selenidera and Andigena Toucans (Aves: Ramphastidae)
HL Lutz, JD Weckstein, JSL Patané, JM Bates, A Aleixo
Molecular phylogenetics and evolution 69 (3), 873-883, 2013
402013
Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae
RAB Assis, LC Polloni, JSL Patané, S Thakur, EB Felestrino, ...
Scientific reports 7 (1), 16133, 2017
392017
Biochemical, Transcriptomic and Proteomic Analyses of Digestion in the Scorpion Tityus serrulatus: Insights into Function and Evolution of Digestion in an Ancient …
FJ Fuzita, MWH Pinkse, JSL Patane, MA Juliano, PDEM Verhaert, ...
PloS one 10 (4), e0123841, 2015
392015
A novel Sporothrix brasiliensis genomic variant in Midwestern Brazil: evidence for an older and wider sporotrichosis epidemic
J Eudes Filho, IBD Santos, CMS Reis, JSL Patané, V Paredes, ...
Emerging microbes & infections 9 (1), 2515-2525, 2020
342020
Nucleocapsid (N) gene mutations of SARS-CoV-2 can affect real-time RT-PCR diagnostic and impact false-negative results
JCC Lesbon, MD Poleti, EC de Mattos Oliveira, JSL Patané, LG Clemente, ...
Viruses 13 (12), 2474, 2021
332021
Phylogenomics
JSL Patané, J Martins Jr., JC Setubal
Methods in Molecular Biology - Comparative Genomics 1704, 103-187, 2018
332018
High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders
FJ Fuzita, MWH Pinkse, JSL Patane, PDEM Verhaert, AR Lopes
BMC genomics 17, 1-19, 2016
322016
Genomic monitoring unveil the early detection of the SARS‐CoV‐2 B. 1.351 (beta) variant (20H/501Y. V2) in Brazil
SN Slavov, JSL Patané, RS Bezerra, M Giovanetti, V Fonseca, AJ Martins, ...
Journal of medical virology 93 (12), 6782-6787, 2021
312021
Genome-resolved metagenome and metatranscriptome analyses of thermophilic composting reveal key bacterial players and their metabolic interactions
LPP Braga, RV Pereira, LF Martins, LMS Moura, FB Sanchez, JSL Patané, ...
BMC genomics 22, 1-19, 2021
302021
Synthesizing and databasing fossil calibrations: divergence dating and beyond
DT Ksepka, MJ Benton, MT Carrano, MA Gandolfo, JJ Head, EJ Hermsen, ...
Biology Letters 7 (6), 801-803, 2011
302011
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