| Structural biology in the clouds: the WeNMR-EOSC ecosystem RV Honorato, PI Koukos, B Jiménez-García, A Tsaregorodtsev, M Verlato, ... Frontiers in molecular biosciences 8, 729513, 2021 | 447 | 2021 |
| Molecular dynamics simulations in drug discovery and pharmaceutical development OMH Salo-Ahen, I Alanko, R Bhadane, AMJJ Bonvin, RV Honorato, ... Processes 9 (1), 71, 2020 | 315 | 2020 |
| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 123 | 2019 |
| KVFinder: steered identification of protein cavities as a PyMOL plugin SHP Oliveira, FAN Ferraz, RV Honorato, J Xavier-Neto, TJP Sobreira, ... BMC bioinformatics 15, 1-8, 2014 | 114 | 2014 |
| Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021 | 100 | 2021 |
| Active glutaminase C self-assembles into a supratetrameric oligomer that can be disrupted by an allosteric inhibitor APS Ferreira, A Cassago, K de Almeida Gonçalves, MM Dias, ... Journal of Biological Chemistry 288 (39), 28009-28020, 2013 | 94 | 2013 |
| Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 β-glucosidase from Exiguobacterium antarcticum B7 LM Zanphorlin, PO de Giuseppe, RV Honorato, CCC Tonoli, J Fattori, ... Scientific reports 6 (1), 23776, 2016 | 70 | 2016 |
| Molecular mechanisms associated with xylan degradation by Xanthomonas plant pathogens CR Santos, ZB Hoffmam, VP de Matos Martins, LM Zanphorlin, ... Journal of Biological Chemistry 289 (46), 32186-32200, 2014 | 69 | 2014 |
| Less is more: coarse-grained integrative modeling of large biomolecular assemblies with HADDOCK J Roel-Touris, CG Don, R V. Honorato, JP Rodrigues, AMJJ Bonvin Journal of chemical theory and computation 15 (11), 6358-6367, 2019 | 53 | 2019 |
| An antibiotic from an uncultured bacterium binds to an immutable target R Shukla, AJ Peoples, KC Ludwig, S Maity, MGN Derks, S De Benedetti, ... Cell 186 (19), 4059-4073. e27, 2023 | 48 | 2023 |
| Identification of novel interaction between ADAM17 (a disintegrin and metalloprotease 17) and thioredoxin-1 AZB Aragão, MLC Nogueira, DC Granato, FM Simabuco, RV Honorato, ... Journal of Biological Chemistry 287 (51), 43071-43082, 2012 | 42 | 2012 |
| The molecular motor Myosin Va interacts with the cilia-centrosomal protein RPGRIP1L LHP Assis, RMP Silva-Junior, LG Dolce, MR Alborghetti, RV Honorato, ... Scientific reports 7 (1), 43692, 2017 | 40 | 2017 |
| Structural insights into functional overlapping and differentiation among myosin V motors AFZ Nascimento, DM Trindade, CCC Tonoli, PO de Giuseppe, LHP Assis, ... Journal of Biological Chemistry 288 (47), 34131-34145, 2013 | 37 | 2013 |
| MARTINI-based protein-DNA coarse-grained HADDOCKing RV Honorato, J Roel-Touris, AMJJ Bonvin Frontiers in molecular biosciences 6, 102, 2019 | 35 | 2019 |
| The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans CR Dos Santos, PO de Giuseppe, FHM de Souza, LM Zanphorlin, ... Biotechnology for biofuels 11, 1-19, 2018 | 34 | 2018 |
| Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases CR Santos, CC Polo, MCMF Costa, AFZ Nascimento, AN Meza, J Cota, ... Journal of Biological Chemistry 289 (11), 7362-7373, 2014 | 32 | 2014 |
| Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023 | 31 | 2023 |
| Kinase inhibitor profile for human nek1, nek6, and nek7 and analysis of the structural basis for inhibitor specificity EC Moraes, GV Meirelles, RV Honorato, TDACB De Souza, EE De Souza, ... Molecules 20 (1), 1176-1191, 2015 | 28 | 2015 |
| PI class metalloproteinase from Bothrops moojeni venom is a post-proline cleaving peptidase with kininogenase activity: Insights into substrate selectivity and kinetic behavior DN Okamoto, MY Kondo, LCG Oliveira, RV Honorato, LM Zanphorlin, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (3), 545-552, 2014 | 27 | 2014 |
| Bactericidal activity identified in 2S albumin from sesame seeds and in silico studies of structure–function relations S Maria-Neto, RV Honorato, FT Costa, RG Almeida, DS Amaro, ... The Protein Journal 30, 340-350, 2011 | 26 | 2011 |
Octavio Luiz FrancoUniversidade Católica Dom Bosco, Universidade Catolica de Brasilia, Universidade de BrasiliaVerified email at ucdb.br
