Jo Vandesompele

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Pieter Mestdaghpostdoctoral fellow, Ghent UniversityVerified email at ugent.be
Katleen De Preterfull research professor, Ghent UniversityVerified email at ugent.be
Michael W. PfafflProfessor of Molecular Physiology, TUM Technische Universität München Technical University of MunichVerified email at gene-quantification.info
Mikael KubistaInstitute of Biotechnology, CAS, Life Genomics ABVerified email at ibt.cas.cz
Björn MentenCenter for Medical Genetics, Department of Biomolecular Medicine,Ghent UniversityVerified email at ugent.be
Stephen BustinProfessor of Molecular Medicine, Anglia Ruskin UniversityVerified email at aru.ac.uk
Jim F HuggettNational Measurement Laboratory/University of SurreyVerified email at lgcgroup.com
Pieter-Jan VoldersBioinformatician (Jessa Hospital), Guest professor (Ghent University)Verified email at ugent.be
Carl WittwerProfessor of Pathology, University of UtahVerified email at path.utah.edu
Pieter Van VlierbergheFull Professor, Ghent University, Ghent, BelgiumVerified email at ugent.be
Anneleen DecockPostdoctoral Researcher, Ghent UniversityVerified email at ugent.be
Frank WestermannAssociate Professor of Tumor Biology and Personalized MedicineVerified email at dkfz.de
Celine EveraertPhD student Universiteit GentVerified email at ugent.be
Bram De WildeUgentVerified email at ugent.be
Olivier THASProfessor of Biostatistics, Hasselt University, Ghent University and University of WollongongVerified email at uhasselt.be
Maté OngenaertPrincipal Scientist II Computational Biology at Johnson & Johnson Innovative MedicineVerified email at its.jnj.com
Francisco Avila CobosPostdoctoral researcher, Ghent UniversityVerified email at UGent.be
Stallings RLEmeritus Professor of Cancer Genetics, RCSI University of Medicine and Health Sciences, IrelandVerified email at rcsi.ie
Stefaan DerveauxManaging Director WaferGen Biosystems Europe S.à r.l.Verified email at wafergen.com
Kris GevaertSenior Full Professor, Ghent University, BelgiumVerified email at vib-ugent.be

Jo Vandesompele

professor in functional cancer genomics and applied bioinformatics

Verified email at ugent.be - Homepage

cancer non-coding RNA liquid biopsy qPCR dPCR


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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes J Vandesompele, K De Preter, F Pattyn, B Poppe, N Van Roy, ... Genome biology 3, 1-12, 2002	22237	2002
The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments SA Bustin, V Benes, JA Garson, J Hellemans, J Huggett, M Kubista, ... Clinical chemistry 55 (4), 611-622, 2009	16692	2009
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data J Hellemans, G Mortier, A De Paepe, F Speleman, J Vandesompele Genome biology 8, 1-14, 2007	4563	2007
miR-9, a MYC/MYCN-activated microRNA, regulates E-cadherin and cancer metastasis L Ma, J Young, H Prabhala, E Pan, P Mestdagh, D Muth, ... Nature cell biology 12 (3), 247-256, 2010	1670	2010
Integrative genome analyses identify key somatic driver mutations of small-cell lung cancer M Peifer, L Fernández-Cuesta, ML Sos, J George, D Seidel, LH Kasper, ... Nature genetics 44 (10), 1104-1110, 2012	1531	2012
A novel and universal method for microRNA RT-qPCR data normalization P Mestdagh, P Van Vlierberghe, A De Weer, D Muth, F Westermann, ... Genome biology 10, 1-10, 2009	1224	2009
EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research J Van Deun, P Mestdagh, P Agostinis, Ö Akay, S Anand, J Anckaert, ... Nature methods 14 (3), 228-232, 2017	1046	2017
The impact of disparate isolation methods for extracellular vesicles on downstream RNA profiling J Van Deun, P Mestdagh, R Sormunen, V Cocquyt, K Vermaelen, ... Journal of extracellular vesicles 3 (1), 24858, 2014	1036	2014
How to do successful gene expression analysis using real-time PCR S Derveaux, J Vandesompele, J Hellemans Methods 50 (4), 227-230, 2010	942	2010
The Digital MIQE Guidelines: Minimum Information for Publication of Quantitative Digital PCR Experiments JF Huggett, CA Foy, V Benes, K Emslie, JA Garson, R Haynes, ... Clinical chemistry 59 (6), 892-902, 2013	923	2013
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Nature biotechnology 32 (9), 903-914, 2014	878	2014
Gain of chromosome arm 17q and adverse outcome in patients with neuroblastoma N Bown, S Cotterill, M Łastowska, S O'Neill, ADJ Pearson, D Plantaz, ... New England Journal of Medicine 340 (25), 1954-1961, 1999	692	1999
Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study P Mestdagh, N Hartmann, L Baeriswyl, D Andreasen, N Bernard, C Chen, ... Nature methods 11 (8), 809-815, 2014	681	2014
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ... Nature biotechnology 26 (8), 889-896, 2008	625	2008
LNCipedia: a database for annotated human lncRNA transcript sequences and structures PJ Volders, K Helsens, X Wang, B Menten, L Martens, K Gevaert, ... Nucleic acids research 41 (D1), D246-D251, 2013	585	2013
Melanoma addiction to the long non-coding RNA SAMMSON E Leucci, R Vendramin, M Spinazzi, P Laurette, M Fiers, J Wouters, ... Nature 531 (7595), 518-522, 2016	572	2016
Standardization of real-time PCR gene expression data from independent biological replicates E Willems, L Leyns, J Vandesompele Analytical biochemistry 379 (1), 127-129, 2008	558	2008
Loss-of-function mutations in LEMD3 result in osteopoikilosis, Buschke-Ollendorff syndrome and melorheostosis J Hellemans, O Preobrazhenska, A Willaert, P Debeer, PCM Verdonk, ... Nature genetics 36 (11), 1213-1218, 2004	536	2004
LNCipedia 5: towards a reference set of human long non-coding RNAs PJ Volders, J Anckaert, K Verheggen, J Nuytens, L Martens, P Mestdagh, ... Nucleic acids research 47 (D1), D135-D139, 2019	490	2019
Emerging patterns of cryptic chromosomal imbalance in patients with idiopathic mental retardation and multiple congenital anomalies: a new series of 140 patients and review of … B Menten, N Maas, B Thienpont, K Buysse, J Vandesompele, C Melotte, ... Journal of medical genetics 43 (8), 625-633, 2006	469	2006

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