Rupert A. Collins
Title
Cited by
Cited by
Year
The seven deadly sins of DNA barcoding
RA Collins, RH Cruickshank
Molecular Ecology Resources 13 (6), 969-975, 2013
4622013
Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding
SDJ Brown, RA Collins, S Boyer, MC Lefort, J Malumbres-Olarte, CJ Vink, ...
Molecular Ecology Resources 12 (3), 562-565, 2012
3872012
Barcoding's next top model: an evaluation of nucleotide substitution models for specimen identification
RA Collins, LM Boykin, RH Cruickshank, KF Armstrong
Methods in Ecology and Evolution 3 (3), 457-465, 2012
1902012
Barcoding and border biosecurity: identifying cyprinid fishes in the aquarium trade
RA Collins, KF Armstrong, R Meier, Y Yi, SDJ Brown, RH Cruickshank, ...
PLoS ONE 7 (1), e28381, 2012
1612012
Persistence of environmental DNA in marine systems
RA Collins, OS Wangensteen, EJ O’Gorman, S Mariani, DW Sims, ...
Communications Biology 1 (1), 185, 2018
1212018
Non‐specific amplification compromises environmental DNA metabarcoding with COI
RA Collins, J Bakker, OS Wangensteen, AZ Soto, L Corrigan, DW Sims, ...
Methods in Ecology and Evolution, 10.1111/2041‐210X.13276, 2019
782019
Something in the water: biosecurity monitoring of ornamental fish imports using environmental DNA
RA Collins, KF Armstrong, AJ Holyoake, S Keeling
Biological Invasions 15 (6), 1209-1215, 2013
602013
Sliding window analyses for optimal selection of mini-barcodes, and application to 454-pyrosequencing for specimen identification from degraded DNA
S Boyer, SDJ Brown, RA Collins, RH Cruickshank, MC Lefort, ...
PLoS ONE 7 (5), e38215, 2012
492012
One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon
VN Machado, RA Collins, RP Ota, MC Andrade, IP Farias, T Hrbek
Scientific Reports 8 (1), 8387, 2018
442018
Known knowns, known unknowns, unknown unknowns and unknown knowns in DNA barcoding: a comment on Dowton et al.
RA Collins, RH Cruickshank
Systematic Biology 63 (6), 1005-1009, 2014
422014
An in silico comparison of protocols for dated phylogenomics
RA Collins, T Hrbek
Systematic Biology 64 (4), 633-650, 2018
29*2018
Phylogenetic systematics of leaffishes (Teleostei: Polycentridae, Nandidae)
RA Collins, R Britz, L Rüber
Journal of Zoological Systematics and Evolutionary Research 53 (4), 259-272, 2015
282015
Climate change drives poleward increases and equatorward declines in marine species
RA Hastings, LA Rutterford, JJ Freer, RA Collins, SD Simpson, MJ Genner
Current Biology 30 (8), 1572-1577. e2, 2020
242020
Environmental DNA-based xenomonitoring for determining Schistosoma presence in tropical freshwaters
H Alzaylaee, RA Collins, A Shechonge, BP Ngatunga, ER Morgan, ...
Parasites & vectors 13 (1), 1-11, 2020
102020
Schistosoma species detection by environmental DNA assays in African freshwaters
H Alzaylaee, RA Collins, G Rinaldi, A Shechonge, B Ngatunga, ...
PLoS neglected tropical diseases 14 (3), e0008129, 2020
102020
Biogeography and species delimitation of the rheophilic suckermouth-catfish genus Pseudolithoxus (Siluriformes: Loricariidae), with the description of a new species from the …
RA Collins, AG Bifi, RR de Oliveira, ED Ribeiro, NK Lujan, ...
Systematics and Biodiversity, 10.1080/14772000.2018.1468362, 2018
72018
Integrative taxonomy reveals a new species of pacu (Characiformes: Serrasalmidae: Myloplus) from the Brazilian Amazon
RP Ota, VN Machado, MC Andrade, RA Collins, IP Farias, T Hrbek
Neotropical Ichthyology 18, 2020
52020
Estuarine molecular bycatch as a landscape-wide biomonitoring tool
S Mariani, LR Harper, RA Collins, C Baillie, OS Wangensteen, ...
bioRxiv, 2021
32021
From shallow to deep divergences: mixed messages from Amazon Basin cichlids
APC Carvalho, RA Collins, JG Martínez, IP Farias, T Hrbek
Hydrobiologia, 1-13, 2018
32018
A preliminary inventory of the catfishes of the lower Rio Nhamundá, Brazil (Ostariophysi, Siluriformes)
RA Collins, E Duarte Ribeiro, V Nogueira Machado, T Hrbek, IP Farias
Biodiversity Data Journal 3, e4162, 2015
32015
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Articles 1–20