Paul B. Frandsen
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PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses
R Lanfear, PB Frandsen, AM Wright, T Senfeld, B Calcott
Molecular biology and evolution 34 (3), 772-773, 2017
Phylogenomics resolves the timing and pattern of insect evolution
B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ...
Science 346 (6210), 763-767, 2014
Genomic architecture and introgression shape a butterfly radiation
NB Edelman, PB Frandsen, M Miyagi, B Clavijo, J Davey, RB Dikow, ...
Science 366 (6465), 594-599, 2019
Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths
AY Kawahara, D Plotkin, M Espeland, K Meusemann, EFA Toussaint, ...
Proceedings of the National Academy of Sciences 116 (45), 22657-22663, 2019
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
Representation and participation across 20 years of plant genome sequencing
RA Marks, S Hotaling, PB Frandsen, R VanBuren
Nature plants 7 (12), 1571-1578, 2021
Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects
B Wipfler, H Letsch, PB Frandsen, P Kapli, C Mayer, D Bartel, TR Buckley, ...
Proceedings of the National Academy of Sciences 116 (8), 3024-3029, 2019
Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates
PB Frandsen, B Calcott, C Mayer, R Lanfear
BMC evolutionary biology 15, 1-17, 2015
Diversity and ecosystem services of Trichoptera
JC Morse, PB Frandsen, W Graf, JA Thomas
Insects 10 (5), 125, 2019
Toward a genome sequence for every animal: Where are we now?
S Hotaling, JL Kelley, PB Frandsen
Proceedings of the National Academy of Sciences 118 (52), e2109019118, 2021
Deep learning as a tool for ecology and evolution
ML Borowiec, RB Dikow, PB Frandsen, A McKeeken, G Valentini, ...
Methods in Ecology and Evolution, 2022
The Trichoptera barcode initiative: a strategy for generating a species-level Tree of Life
X Zhou, PB Frandsen, RW Holzenthal, CR Beet, KR Bennett, RJ Blahnik, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016
A multigene phylogeny and timeline for Trichoptera (Insecta)
JA Thomas, PB Frandsen, E Prendini, X Zhou, RW Holzenthal
Systematic Entomology 45 (3), 670-686, 2020
Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution”
KM Kjer, JL Ware, J Rust, T Wappler, R Lanfear, LS Jermiin, X Zhou, ...
Science 349 (6247), 487, 2015
Long-reads are revolutionizing 20 years of insect genome sequencing
S Hotaling, JS Sproul, J Heckenhauer, A Powell, AM Larracuente, ...
Genome Biology and Evolution, 2021
Applications of deep convolutional neural networks to digitized natural history collections
E Schuettpelz, PB Frandsen, RB Dikow, A Brown, S Orli, M Peters, ...
Biodiversity data journal, 2017
Phylogeny and classification of Odonata using targeted genomics
SM Bybee, VJ Kalkman, RJ Erickson, PB Frandsen, JW Breinholt, ...
Molecular phylogenetics and evolution 160, 107115, 2021
Gene reuse facilitates rapid radiation and independent adaptation to diverse habitats in the Asian honeybee
Y Ji, X Li, T Ji, J Tang, L Qiu, J Hu, J Dong, S Luo, S Liu, PB Frandsen, ...
Science Advances 6 (51), eabd3590, 2020
A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins
AY Kawahara, C Storer, APS Carvalho, DM Plotkin, FL Condamine, ...
Nature ecology & evolution 7 (6), 903-913, 2023
Aquatic insects are dramatically underrepresented in genomic research
S Hotaling, JL Kelley, PB Frandsen
Insects 11 (9), 601, 2020
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