Masaki MIYA (宮 正樹)
Masaki MIYA (宮 正樹)
Natural History Museum and Institute, Chiba
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Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences
M Miya, H Takeshima, H Endo, NB Ishiguro, JG Inoue, T Mukai, TP Satoh, ...
Molecular Phylogenetics and Evolution 26 (1), 121-138, 2003
MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
M Miya, Y Sato, T Fukunaga, T Sado, JY Poulsen, K Sato, T Minamoto, ...
Royal Society Open Science 2, 150088, 2015
MitoFish and MitoAnnotator: A mitochondrial genome database of fish with an accurate and automatic annotation pipeline
W Iwasaki, T Fukunaga, R Isagozawa, K Yamada, Y Maeda, TP Satoh, ...
Molecular Biology and Evolution 30 (11), 2531-2540, 2013
Phylogenetic classification of bony fishes
R Betancur-R, EO Wiley, G Arratia, A Acero, N Bailly, M Miya, G Lecointre, ...
BMC Evolutionary Biology 17, 162, 2017
Mitogenomic exploration of higher teleostean phylogenies: a case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences
M Miya, A Kawaguchi, M Nishida
Molecular Biology and Evolution 18 (11), 1993-2009, 2001
Use of mitogenomic information in teleostean molecular phylogenetics: a tree-based exploration under the maximum-parsimony optimality criterion
M Miya, M Nishida
Molecular Phylogenetics and Evolution 17 (3), 437-455, 2000
Mitogenomic evolution and interrelationships of the Cypriniformes (Actinopterygii: Ostariophysi): the first evidence toward resolution of higher-level relationships of the …
K Saitoh, T Sado, RL Mayden, N Hanzawa, K Nakamura, M Nishida, ...
Journal of Molecular Evolution 63 (6), 826-841, 2006
How meaningful are Bayesian support values?
MP Simmons, KM Pickett, M Miya
Molecular Biology and Evolution 21 (1), 188-199, 2004
Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the “ancient fish”
JG Inoue, M Miya, K Tsukamoto, M Nishida
Molecular Phylogenetics and Evolution 26 (1), 110-120, 2003
Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): first example of transfer RNA gene rearrangements in bony fishes
M Miya, M Nishida
Marine Biotechnology 1 (5), 416-426, 1999
Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea
S Yamamoto, R Masuda, Y Sato, T Sado, H Araki, M Kondoh, T Minamoto, ...
Scientific Reports 6, 40368, 2017
A mitogenomic perspective on the basal teleostean phylogeny: resolving higher-level relationships with longer DNA sequences
JG Inoue, M Miya, K Tsukamoto, M Nishida
Molecular Phylogenetics and Evolution 20 (2), 275-285, 2001
Phylogeny and polyploidy: Resolving the classification of cyprinine fishes (Teleostei: Cypriniformes)
L Yang, T Sado, MV Hirt, E Pasco-Viel, M Arunachalam, J Li, X Wang, ...
Molecular Phylogenetics and Evolution 85 (1), 97–116, 2015
Mitochondrial genomics of ostariophysan fishes: perspectives on phylogeny and biogeography
K Saitoh, M Miya, JG Inoue, NB Ishiguro, M Nishida
Journal of Molecular Evolution 56 (4), 464-472, 2003
Basal euteleostean relationships: a mitogenomic perspective on the phylogenetic reality of the “Protacanthopterygii”
NB Ishiguro, M Miya, M Nishida
Molecular Phylogenetics and Evolution 27 (3), 476-488, 2003
Environmental DNA provides a ‘snapshot’ of fish distribution: a case study of Japanese jack mackerel in Maizuru Bay, Sea of Japan
Y Yamamoto, K Minami, K Fukaya, K Takahashi, H Sawada, S Tsuji, ...
PLoS ONE 11 (3), e0149786, 2016
Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences
Y Minegishi, J Aoyama, JG Inoue, M Miya, M Nishida, K Tsukamoto
Molecular Phylogenetics and Evolution 34 (1), 134-146, 2005
Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective
JG Inoue, M Miya, K Lam, BH Tay, JA Danks, J Bell, TI Walker, ...
Molecular Biology and Evolution 27 (11), 2576-2586, 2010
Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus
JG Inoue, M Miya, K Tsukamoto, M Nishida
Fisheries Science 66 (5), 924-932, 2000
Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation
M Nakatani, M Miya, K Mabuchi, K Saitoh, M Nishida
BMC Evolutionary Biology 11 (1), 177, 2011
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