François Blanquart
François Blanquart
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A practical guide to measuring local adaptation
F Blanquart, O Kaltz, SL Nuismer, S Gandon
Ecology letters 16 (9), 1195-1205, 2013
The effects of migration and drift on local adaptation to a heterogeneous environment
F Blanquart, S Gandon, SL Nuismer
Journal of evolutionary biology 25 (7), 1351-1363, 2012
Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage
S Lehtinen, F Blanquart, NJ Croucher, P Turner, M Lipsitch, C Fraser
Proceedings of the National Academy of Sciences 114 (5), 1075-1080, 2017
Quantifying the relationship between SARS-CoV-2 viral load and infectiousness
A Marc, M Kerioui, F Blanquart, J Bertrand, O Mitja, M Corbacho-Monné, ...
Elife 10, e69302, 2021
What drives parallel evolution? How population size and mutational variation contribute to repeated evolution
SF Bailey, F Blanquart, T Bataillon, R Kassen
BioEssays 39 (1), 1-9, 2017
Properties of selected mutations and genotypic landscapes under Fisher's geometric model
F Blanquart, G Achaz, T Bataillon, O Tenaillon
Evolution 68 (12), 3537–3554, 2014
Phage–host coevolution in natural populations
D Piel, M Bruto, Y Labreuche, F Blanquart, D Goudenège, R Barcia-Cruz, ...
Nature Microbiology 7 (7), 1075-1086, 2022
Evolutionary epidemiology models to predict the dynamics of antibiotic resistance
F Blanquart
Evolutionary applications 12 (3), 365-383, 2019
Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y. V1 (B. 1.1. 7, variant of concern 202012/01) in France, January to March 2021
A Gaymard, P Bosetti, A Feri, G Destras, V Enouf, A Andronico, S Burrel, ...
Eurosurveillance 26 (9), 2100133, 2021
Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver
C Wymant, F Blanquart, T Golubchik, A Gall, M Bakker, D Bezemer, ...
Virus evolution 4 (1), vey007, 2018
On the evolutionary ecology of multidrug resistance in bacteria
S Lehtinen, F Blanquart, M Lipsitch, C Fraser, ...
PLoS pathogens 15 (5), e1007763, 2019
A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda
F Blanquart, MK Grabowski, J Herbeck, F Nalugoda, D Serwadda, ...
Elife 5, e20492, 2016
Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe
F Blanquart, C Wymant, M Cornelissen, A Gall, M Bakker, D Bezemer, ...
PLoS biology 15 (6), e2001855, 2017
The evolution of antibiotic resistance in a structured host population
F Blanquart, S Lehtinen, M Lipsitch, C Fraser
Journal of The Royal Society Interface 15 (143), 20180040, 2018
Evolution of migration in a periodically changing environment
F Blanquart, S Gandon
The American Naturalist 177 (2), 188-201, 2011
Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action
P Czuppon, F Débarre, A Gonçalves, O Tenaillon, AS Perelson, J Guedj, ...
PLoS computational biology 17 (3), e1008752, 2021
A highly virulent variant of HIV-1 circulating in the Netherlands
C Wymant, D Bezemer, F Blanquart, L Ferretti, A Gall, M Hall, T Golubchik, ...
Science 375 (6580), 540-545, 2022
Time‐shift experiments and patterns of adaptation across time and space
F Blanquart, S Gandon
Ecology letters 16 (1), 31-38, 2013
Characterisation of vaccine breakthrough infections of SARS-CoV-2 Delta and Alpha variants and within-host viral load dynamics in the community, France, June to July 2021
F Blanquart, C Abad, J Ambroise, M Bernard, G Cosentino, JM Giannoli, ...
Eurosurveillance 26 (37), 2100824, 2021
An evolutionary model to predict the frequency of antibiotic resistance under seasonal antibiotic use, and an application to Streptococcus pneumoniae
F Blanquart, S Lehtinen, C Fraser
Proceedings of the Royal Society B: Biological Sciences 284 (1855), 20170679, 2017
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