| BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019 | 3219 | 2019 |
| Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity C Hoorn, FP Wesselingh, H Ter Steege, MA Bermudez, A Mora, J Sevink, ... science 330 (6006), 927-931, 2010 | 2498 | 2010 |
| Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification RW Meredith, JE Janečka, J Gatesy, OA Ryder, CA Fisher, EC Teeling, ... Science 334 (6055), 521-524, 2011 | 1511 | 2011 |
| The conditioned reconstructed process T Gernhard Journal of theoretical biology 253 (4), 769-778, 2008 | 1027 | 2008 |
| The fossilized birth–death process for coherent calibration of divergence-time estimates TA Heath, JP Huelsenbeck, T Stadler Proceedings of the National Academy of Sciences 111 (29), E2957-E2966, 2014 | 718 | 2014 |
| Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 EB Hodcroft, M Zuber, S Nadeau, TG Vaughan, KHD Crawford, ... Nature 595 (7869), 707-712, 2021 | 598 | 2021 |
| Birth–death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV) T Stadler, D Kühnert, S Bonhoeffer, AJ Drummond Proceedings of the National Academy of Sciences 110 (1), 228-233, 2013 | 550 | 2013 |
| Practical considerations for measuring the effective reproductive number, Rt KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ... PLoS computational biology 16 (12), e1008409, 2020 | 497 | 2020 |
| Macroevolutionary Dynamics and Historical Biogeography of Primate Diversification Inferred from a Species Supermatrix MS Springer, RW Meredith, J Gatesy, CA Emerling, J Park, DL Rabosky, ... PloS one 7 (11), e49521, 2012 | 460 | 2012 |
| Sampling-through-time in birth–death trees T Stadler Journal of theoretical biology 267 (3), 396-404, 2010 | 452 | 2010 |
| Mammalian phylogeny reveals recent diversification rate shifts T Stadler Proceedings of the National Academy of Sciences 108 (15), 6187-6192, 2011 | 441 | 2011 |
| On incomplete sampling under birth-death models and connections to the sampling-based coalescent T Stadler Journal of theoretical biology 261 (1), 58-66, 2009 | 412 | 2009 |
| Diversity-dependence brings molecular phylogenies closer to agreement with the fossil record RS Etienne, B Haegeman, T Stadler, T Aze, PN Pearson, A Purvis, ... Proceedings of the Royal Society B: Biological Sciences, 2012 | 361 | 2012 |
| Total-evidence dating under the fossilized birth–death process C Zhang, T Stadler, S Klopfstein, TA Heath, F Ronquist Systematic biology 65 (2), 228-249, 2016 | 349 | 2016 |
| Bayesian inference of sampled ancestor trees for epidemiology and fossil calibration A Gavryushkina, D Welch, T Stadler, AJ Drummond PLoS computational biology 10 (12), e1003919, 2014 | 336 | 2014 |
| Bayesian total-evidence dating reveals the recent crown radiation of penguins A Gavryushkina, TA Heath, DT Ksepka, T Stadler, D Welch, AJ Drummond Systematic biology 66 (1), 57-73, 2017 | 314 | 2017 |
| Simulating trees with a fixed number of extant species T Stadler Systematic biology 60 (5), 676-684, 2011 | 278 | 2011 |
| Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 262 | 2020 |
| CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants C Chen, S Nadeau, M Yared, P Voinov, N Xie, C Roemer, T Stadler Bioinformatics 38 (6), 1735-1737, 2022 | 237 | 2022 |
| Estimating the basic reproductive number from viral sequence data T Stadler, R Kouyos, V von Wyl, S Yerly, J Böoni, P Bürgisser, T Klimkait, ... Molecular Biology and Evolution, 2012 | 231 | 2012 |
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
