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Duncan Ralph
Duncan Ralph
Verified email at fredhutch.org
Title
Cited by
Cited by
Year
Combined results of searches for the standard model Higgs boson in pp collisions at s= 7 TeV
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Physics Letters B 710 (1), 26-48, 2012
13092012
Measurement of the properties of a Higgs boson in the four-lepton final state
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Physical Review D 89 (9), 092007, 2014
12152014
Evidence for the 125 GeV Higgs boson decaying to a pair of τ leptons
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Journal of High Energy Physics 2014 (5), 1-72, 2014
8262014
Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation
DK Ralph, FA Matsen IV
PLoS computational biology 12 (1), e1004409, 2016
1372016
Likelihood-based inference of B cell clonal families
DK Ralph, FA Matsen IV
PLoS computational biology 12 (10), e1005086, 2016
1012016
AIRR community standardized representations for annotated immune repertoires
JA Vander Heiden, S Marquez, N Marthandan, SAC Bukhari, CE Busse, ...
Frontiers in immunology 9, 2206, 2018
822018
Per-sample immunoglobulin germline inference from B cell receptor deep sequencing data
DK Ralph, FA Matsen IV
PLoS computational biology 15 (7), e1007133, 2019
672019
Inferred allelic variants of immunoglobulin receptor genes: a system for their evaluation, documentation, and naming
M Ohlin, C Scheepers, M Corcoran, WD Lees, CE Busse, D Bagnara, ...
Frontiers in immunology 10, 435, 2019
612019
Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
CA Simonich, L Doepker, D Ralph, JA Williams, A Dhar, Z Yaffe, L Gentles, ...
Nature Communications 10 (1), 2190, 2019
382019
sumrep: A Summary Statistic Framework for Immune Receptor Repertoire Comparison and Model Validation
BJ Olson, P Moghimi, CA Schramm, A Obraztsova, D Ralph, ...
Frontiers in immunology 10, 2533, 2019
292019
A Bayesian phylogenetic hidden Markov model for B cell receptor sequence analysis
A Dhar, DK Ralph, VN Minin, FA Matsen IV
PLoS computational biology 16 (8), e1008030, 2020
232020
FA (2016a). Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation
DK Ralph, IV Matsen
PLoS Comput. Biol 12, e1004409, 0
18
Using B cell receptor lineage structures to predict affinity
DK Ralph, FA Matsen IV
PLOS Computational Biology 16 (11), e1008391, 2020
142020
Diversity and function of maternal HIV-1-specific antibodies at the time of vertical transmission
LE Doepker, CA Simonich, D Ralph, MM Shipley, M Garrett, T Gobillot, ...
Journal of Virology 94 (9), 10.1128/jvi. 01594-19, 2020
132020
Inference of B cell clonal families using heavy/light chain pairing information
DK Ralph, FA Matsen IV
PLOS Computational Biology 18 (11), e1010723, 2022
112022
Development of antibody-dependent cell cytotoxicity function in HIV-1 antibodies
LE Doepker, S Danon, E Harkins, DK Ralph, Z Yaffe, ME Garrett, A Dhar, ...
Elife 10, e63444, 2021
102021
Functional development of a V3/glycan-specific broadly neutralizing antibody isolated from a case of HIV superinfection
MM Shipley, VM Prasad, LE Doepker, A Dingens, DK Ralph, E Harkins, ...
Elife 10, e68110, 2021
72021
AIRR-C IG Reference Sets: curated sets of immunoglobulin heavy and light chain germline genes
AM Collins, M Ohlin, M Corcoran, JM Heather, D Ralph, M Law, ...
Frontiers in Immunology 14, 1330153, 2024
62024
Single B cell transcriptomics identifies multiple isotypes of broadly neutralizing antibodies against flaviviruses
J Lubow, LM Levoir, DK Ralph, L Belmont, M Contreras, ...
PLoS Pathogens 19 (10), e1011722, 2023
62023
AIRR community curation and standardised representation for immunoglobulin and T cell receptor germline sets
WD Lees, S Christley, A Peres, JT Kos, B Corrie, D Ralph, F Breden, ...
ImmunoInformatics 10, 100025, 2023
62023
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Articles 1–20