RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets DP Martin, A Varsani, P Roumagnac, G Botha, S Maslamoney, T Schwab, ... Virus Evolution 7 (1), veaa087, 2021 | 304 | 2021 |
High-depth African genomes inform human migration and health A Choudhury, S Aron, LR Botigué, D Sengupta, G Botha, T Bensellak, ... Nature 586 (7831), 741-748, 2020 | 235 | 2020 |
Microbial composition predicts genital tract inflammation and persistent bacterial vaginosis in South African adolescent females K Lennard, S Dabee, SL Barnabas, E Havyarimana, A Blakney, ... Infection and immunity 86 (1), 10.1128/iai. 00410-17, 2018 | 181 | 2018 |
Whole-genome sequencing for an enhanced understanding of genetic variation among South Africans A Choudhury, M Ramsay, S Hazelhurst, S Aron, S Bardien, G Botha, ... Nature communications 8 (1), 2062, 2017 | 107 | 2017 |
Factors that affect the accuracy of text-based language identification GR Botha, E Barnard Computer Speech & Language 26 (5), 307-320, 2012 | 61 | 2012 |
Association of maternal prenatal psychological stressors and distress with maternal and early infant faecal bacterial profile PJW Naudé, S Claassen-Weitz, S Gardner-Lubbe, G Botha, M Kaba, ... Acta neuropsychiatrica 32 (1), 32-42, 2020 | 41 | 2020 |
Text-based language identification for South African languages G Botha, V Zimu, E Barnard SAIEE Africa Research Journal 98 (4), 141-146, 2007 | 38 | 2007 |
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics S Baichoo, Y Souilmi, S Panji, G Botha, A Meintjes, S Hazelhurst, ... BMC bioinformatics 19, 1-13, 2018 | 37 | 2018 |
HIV-exposure, early life feeding practices and delivery mode impacts on faecal bacterial profiles in a South African birth cohort S Claassen-Weitz, S Gardner-Lubbe, P Nicol, G Botha, S Mounaud, ... Scientific reports 8 (1), 5078, 2018 | 37 | 2018 |
The extent and impact of variation in ADME genes in sub-Saharan African populations JEB Da Rocha, H Othman, G Botha, L Cottino, D Twesigomwe, S Ahmed, ... Frontiers in Pharmacology 12, 634016, 2021 | 23 | 2021 |
Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience AE Ahmed, PT Mpangase, S Panji, S Baichoo, Y Souilmi, FM Fadlelmola, ... AAS Open Research 1, 2018 | 19 | 2018 |
Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network CV Jongeneel, O Achinike-Oduaran, E Adebiyi, M Adebiyi, S Adeyemi, ... PLoS computational biology 13 (6), e1005419, 2017 | 17 | 2017 |
Orthographic measures of language distances between the official South African languages PN Zulu, G Botha, E Barnard Literator: Journal of literary criticism, comparative linguistics and …, 2008 | 17 | 2008 |
G6PD distribution in sub-Saharan Africa and potential risks of using chloroquine/hydroxychloroquine based treatments for COVID-19 JEB da Rocha, H Othman, CT Tiemessen, G Botha, M Ramsay, ... The Pharmacogenomics Journal 21 (6), 649-656, 2021 | 14 | 2021 |
Revealing the mutational spectrum in Southern Africans with amyotrophic lateral sclerosis M Nel, AC Mahungu, N Monnakgotla, GR Botha, NJ Mulder, G Wu, ... Neurology: Genetics 8 (1), e654, 2022 | 13 | 2022 |
Two approaches to gathering text corpora from the WorldWideWeb G Botha, E Barnard PRASA, 2005 | 13 | 2005 |
Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa V Ras, G Botha, S Aron, K Lennard, I Allali, S Claassen-Weitz, ... PLoS computational biology 17 (2), e1008640, 2021 | 12 | 2021 |
Repeats expansions in ATXN2, NOP56, NIPA1 and ATXN1 are not associated with ALS in Africans M Nel, T Mavundla, K Gultig, G Botha, N Mulder, M Benatar, J Wuu, ... IBRO Neuroscience Reports 10, 130-135, 2021 | 8 | 2021 |
Vaginal microbiota varies by geographical location in South African women K Lennard, S Dabee, SL Barnabas, E Havyarimana, A Blakney, ... South African Journal for Science and Technology 38, 2019 | 7 | 2019 |
Performance and accuracy evaluation of reference panels for genotype imputation in sub-Saharan African populations D Sengupta, G Botha, A Meintjes, M Mbiyavanga, S Hazelhurst, N Mulder, ... Cell Genomics 3 (6), 2023 | 6 | 2023 |