| A sensitivity analysis of RNA folding nearest neighbor parameters identifies a subset of free energy parameters with the greatest impact on RNA secondary structure prediction J Zuber, H Sun, X Zhang, I McFadyen, DH Mathews Nucleic acids research 45 (10), 6168-6176, 2017 | 40 | 2017 |
| Identification of new high affinity targets for Roquin based on structural conservation J Braun, S Fischer, ZZ Xu, H Sun, DH Ghoneim, AT Gimbel, U Plessmann, ... Nucleic Acids Research 46 (22), 12109-12125, 2018 | 22 | 2018 |
| miR-218 Inhibits Erythroid Differentiation and Alters Iron Metabolism by Targeting ALAS2 in K562 Cells Y Li, S Liu, H Sun, Y Yang, H Qi, N Ding, J Zheng, X Dong, H Qu, Z Zhang, ... International journal of molecular sciences 16 (12), 28156-28168, 2015 | 17 | 2015 |
| Nearest neighbor rules for RNA helix folding thermodynamics: improved end effects J Zuber, SJ Schroeder, H Sun, DH Turner, DH Mathews Nucleic Acids Research 50 (9), 5251-5262, 2022 | 16 | 2022 |
| Surprising sequence effects on GU closure of symmetric 2× 2 nucleotide RNA internal loops KD Berger, SD Kennedy, SJ Schroeder, BM Znosko, H Sun, DH Mathews, ... Biochemistry 57 (14), 2121-2131, 2018 | 7 | 2018 |
| Determining parameters for non-linear models of multi-loop free energy change M Ward, H Sun, A Datta, M Wise, DH Mathews Bioinformatics 35 (21), 4298-4306, 2019 | 6 | 2019 |
| RNA helix thermodynamics: the end game J Zuber, SJ Schroeder, H Sun, DH Turner, DH Mathews Biorxiv, 2021.10. 16.464667, 2021 | 3 | 2021 |
| DNA Structure Design Is Improved Using an Artificially Expanded Alphabet of Base Pairs Including Loop and Mismatch Thermodynamic Parameters TM Pham, T Miffin, H Sun, KK Sharp, X Wang, M Zhu, S Hoshika, ... ACS Synthetic Biology 12 (9), 2750-2763, 2023 | | 2023 |
| Thermodynamic Parameters and Design Considerations for Expanded Alphabet PZ and GZ Base Pairs in DNA JD Kahn, T Miffin, KK Sharp, X Wang, S Hoshika, H Sun, M Zhu, TM Pham, ... Biophysical Journal 120 (3), 220a, 2021 | | 2021 |
| RNA Folding Nearest Neighbor Parameters Derivation and RNA Secondary Structure Prediction H Sun University of Rochester, 2019 | | 2019 |
| Deciphering the Cis-and Trans-regulatory Roles of KLF6 in Primitive Hematopoiesis Q Xiong, Z Zhang, H Qu, X Ruan, H Wang, Q Zhang, H Qi, Y Li, H Sun, ... Blood 120 (21), 4730, 2012 | | 2012 |
| Supplemental Materials: miR-218 Inhibits Erythroid Differentiation and Alters Iron Metabolism by Targeting ALAS2 in K562 Cells Y Li, S Liu, H Sun, Y Yang, H Qi, N Ding, J Zheng, X Dong, H Qu, Z Zhang, ... | | |
David H. MathewsDepartment of Biochemistry and Biophysics, University of Rochester Medical CenterVerified email at urmc.rochester.edu
