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Eike Steinig
Eike Steinig
The Peter Doherty Institute for Infection and Immunity, University of Melbourne
Verified email at unimelb.edu.au - Homepage
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Cited by
Cited by
Year
netview p: a network visualization tool to unravel complex population structure using genome‐wide SNPs
EJ Steinig, M Neuditschko, MS Khatkar, HW Raadsma, KR Zenger
Molecular Ecology Resources 16 (1), 216-227, 2016
1172016
Evolution and global transmission of a multidrug-resistant, community-associated methicillin-resistant Staphylococcus aureus lineage from the Indian subcontinent
EJ Steinig, S Duchene, DA Robinson, S Monecke, M Yokoyama, ...
mBio 10 (6), e01105-19, 2019
101*2019
Mpox diagnostics: Review of current and emerging technologies
CK Lim, J Roberts, M Moso, KC Liew, ML Taouk, E Williams, T Tran, ...
Journal of medical virology 95 (1), e28429, 2023
372023
The effect of nitrogen limitation on acetyl-CoA carboxylase expression and fatty acid content in Chromera velia and Isochrysis aff. galbana (TISO)
R Huerlimann, EJ Steinig, H Loxton, KR Zenger, DR Jerry, K Heimann
Gene 543 (2), 204-211, 2014
352014
Global scale dissemination of ST93: a divergent Staphylococcus aureus epidemic lineage that has recently emerged from remote Northern Australia
SJ van Hal, EJ Steinig, P Andersson, MTG Holden, SR Harris, GR Nimmo, ...
Frontiers in Microbiology 9, 1453, 2018
34*2018
Effects of growth phase and nitrogen starvation on expression of fatty acid desaturases and fatty acid composition of Isochrysis aff. galbana (TISO)
R Huerlimann, EJ Steinig, H Loxton, KR Zenger, DR Jerry, K Heimann
Gene 545 (1), 36-44, 2014
342014
Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus
EJ Steinig, P Andersson, SR Harris, DS Sarovich, A Manoharan, ...
BMC Genomics 16 (1), 388, 2015
292015
Nanoq: ultra-fast quality control for nanopore reads
E Steinig, L Coin
Journal of Open Source Software 7 (69), 2991, 2022
272022
Taking the next-gen step: Comprehensive antimicrobial resistance detection from Burkholderia pseudomallei
DE Madden, JR Webb, EJ Steinig, BJ Currie, EP Price, DS Sarovich
EBioMedicine 63, 2021
252021
Development and validation of a RAD-Seq target-capture based genotyping assay for routine application in advanced black tiger shrimp (Penaeus monodon) breeding programs
JL Guppy, DB Jones, SR Kjeldsen, A Le Port, MS Khatkar, NM Wade, ...
BMC Genomics 21 (541), 2020
232020
Exploring the evolution and epidemiology of European CC1-MRSA-IV: tracking a multidrug-resistant community-associated meticillin-resistant Staphylococcus aureus clone
MR Earls, EJ Steinig, S Monecke, JA Samaniego Castruita, A Simbeck, ...
Microbial genomics 7 (7), 000601, 2021
192021
Phylodynamic signatures in the emergence of community-associated MRSA
E Steinig, I Aglua, S Duchene, MT Meehan, M Yoannes, C Firth, ...
Proceedings of the National Academy of Sciences 119 (45), e2204993119, 2022
172022
Identification of key contributors in complex population structures
M Neuditschko, HW Raadsma, MS Khatkar, E Jonas, EJ Steinig, C Flury, ...
PLOS ONE 12 (5), e0177638, 2017
162017
Phylodynamic inference of bacterial outbreak parameters using nanopore sequencing
E Steinig, S Duchêne, I Aglua, A Greenhill, R Ford, M Yoannes, ...
Molecular Biology and Evolution 39 (3), msac040, 2022
11*2022
Staphylococcus aureus from patients with chronic rhinosinusitis show minimal genetic association between polyp and non-polyp phenotypes
JJ Bardy, DS Sarovich, EP Price, E Steinig, S Tong, A Drilling, J Ou, ...
BMC Ear, Nose and Throat Disorders 18 (1), 16, 2018
112018
Non-SARS-CoV-2 respiratory viral detection and whole genome sequencing from COVID-19 rapid antigen test devices: a laboratory evaluation study
MA Moso*, G Taiaroa*, E Steinig*, M Zhanduisenov, G Butel-Simoes, ...
The Lancet Microbe 5 (4), e317-e325, 2024
32024
Intra- and interhost genomic diversity of monkeypox virus
ML Taouk, E Steinig, G Taiaroa, I Savic, T Tran, N Higgins, S Tran, A Lee, ...
Journal of Medical Virology 95 (1), e29029, 2023
32023
Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
MB Hall, RR Wick, LM Judd, ANT Nguyen, EJ Steinig, O Xie, MR Davies, ...
bioRxiv, 2024.03. 15.585313, 2024
22024
PathoGD: an integrative genomics approach for CRISPR-based target design of rapid pathogen diagnostics
SJ Low, M O'Neill, WJ Kerry, N Wild, M Krysiak, Y Nong, F Azzato, E Hor, ...
bioRxiv, 2024.05. 14.593882, 2024
12024
Genomic neighbor typing for bacterial outbreak surveillance
E Steinig, M Pitt, I Aglua, A Suttie, A Greenhill, C Heather, C Firth, S Smith, ...
bioRxiv, 2022
12022
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