| The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability AD Diehl, TF Meehan, YM Bradford, MH Brush, WM Dahdul, DS Dougall, ... Journal of biomedical semantics 7, 1-10, 2016 | 278 | 2016 |
| Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015 | 237 | 2015 |
| Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon MA Haendel, JP Balhoff, FB Bastian, DC Blackburn, JA Blake, Y Bradford, ... Journal of biomedical semantics 5, 1-13, 2014 | 153 | 2014 |
| The Amazonian neogene fish fauna JG Lundberg, MHS Pérez, WM Dahdul, OA Aguilera Amazonia, landscape and species evolution: a look into the past, 281-301, 2010 | 125 | 2010 |
| Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature WM Dahdul, JP Balhoff, J Engeman, T Grande, EJ Hilton, C Kothari, ... PLoS One 5 (5), e10708, 2010 | 105 | 2010 |
| The teleost anatomy ontology: anatomical representation for the genomics age WM Dahdul, JG Lundberg, PE Midford, JP Balhoff, H Lapp, TJ Vision, ... Systematic biology 59 (4), 369-383, 2010 | 104 | 2010 |
| Phenex: ontological annotation of phenotypic diversity JP Balhoff, WM Dahdul, CR Kothari, H Lapp, JG Lundberg, P Mabee, ... PloS one 5 (5), e10500, 2010 | 104 | 2010 |
| An overview of the BioCreative 2012 Workshop Track III: interactive text mining task CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ... Database 2013, bas056, 2013 | 86 | 2013 |
| Energy Allocation and Postnatal Growth in Captive Elegant Tern (Sterna Elegans) Chicks: Responses to High-Versus Low-Energy Diets WM Dahdul, MH Horn The Auk 120 (4), 1069-1081, 2003 | 63 | 2003 |
| 500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton P Mabee, JP Balhoff, WM Dahdul, H Lapp, PE Midford, TJ Vision, ... Journal of Applied Ichthyology 28 (3), 300-305, 2012 | 60 | 2012 |
| Megapiranha paranensis, a new genus and species of Serrasalmidae (Characiformes, Teleostei) from the upper Miocene of Argentina AL Cione, WM Dahdul, JG Lundberg, A Machado-Allison Journal of Vertebrate Paleontology 29 (2), 350-358, 2009 | 59 | 2009 |
| Phenoscape: identifying candidate genes for evolutionary phenotypes RC Edmunds, B Su, JP Balhoff, BF Eames, WM Dahdul, H Lapp, ... Molecular biology and evolution 33 (1), 13-24, 2015 | 53 | 2015 |
| Nose to tail, roots to shoots: spatial descriptors for phenotypic diversity in the Biological Spatial Ontology WM Dahdul, H Cui, PM Mabee, CJ Mungall, D Osumi-Sutherland, ... Journal of biomedical semantics 5, 1-13, 2014 | 46 | 2014 |
| Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase E Segerdell, VG Ponferrada, C James-Zorn, KA Burns, JD Fortriede, ... Journal of biomedical semantics 4, 1-9, 2013 | 45 | 2013 |
| The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes PE Midford, TA Dececchi, JP Balhoff, WM Dahdul, N Ibrahim, H Lapp, ... Journal of biomedical semantics 4, 1-6, 2013 | 44 | 2013 |
| A unified anatomy ontology of the vertebrate skeletal system WM Dahdul, JP Balhoff, DC Blackburn, AD Diehl, MA Haendel, BK Hall, ... PloS one 7 (12), e51070, 2012 | 43 | 2012 |
| Bioclip: A vision foundation model for the tree of life S Stevens, J Wu, MJ Thompson, EG Campolongo, CH Song, DE Carlyn, ... Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2024 | 40 | 2024 |
| Moving the mountain: analysis of the effort required to transform comparative anatomy into computable anatomy W Dahdul, TA Dececchi, N Ibrahim, H Lapp, P Mabee Database 2015, bav040, 2015 | 33 | 2015 |
| Fossil serrasalmine fishes (Teleostei: Characiformes) from the Lower Miocene of north-western Venezuela WM Dahdul Special Papers in Palaeontology 71, 23-28, 2004 | 29 | 2004 |
| Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems W Dahdul, P Manda, H Cui, JP Balhoff, TA Dececchi, N Ibrahim, H Lapp, ... Database 2018, bay110, 2018 | 25 | 2018 |
