Alexei J. Drummond

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Dong XieDepartment of Computer Science, University of AucklandVerified email at cs.auckland.ac.nz
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
Remco BouckaertVerified email at cs.auckland.ac.nz
Joseph HeledAuckland UniversityVerified email at cs.auckland.ac.nz
Tanja StadlerETH ZurichVerified email at env.ethz.ch
Denise KühnertRobert Koch Institut & Max Planck Institute of GeoanthropologyVerified email at shh.mpg.de
Guy BaeleAssociate Professor, KU LeuvenVerified email at kuleuven.be
Philippe LemeyFull Professor, KU LeuvenVerified email at kuleuven.be
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Simon HoProfessor of Molecular Evolution, University of SydneyVerified email at sydney.edu.au
Beth ShapiroUC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa CruzVerified email at ucsc.edu
Allen RodrigoThe School of Biological Sciences, The University of AucklandVerified email at auckland.ac.nz
Chieh-Hsi WuLecturer in Statistics, University of SouthamptonVerified email at soton.ac.uk
Fábio Kuriki MendesPostdoctoral fellow, Washington University in St. LouisVerified email at wustl.edu
Huw Alexander OgilvieMD Anderson Cancer CenterVerified email at mdanderson.org
Alexandra "Sasha" GavryushkinaResearch fellow at Canterbury UniversityVerified email at canterbury.ac.nz
Matthew J PhillipsQueensland University of TechnologyVerified email at qut.edu.au
David WelchSenior Lecturer, School of Computer Science, University of Auckland Waipapa Taumata RauVerified email at auckland.ac.nz

Alexei J. Drummond

Professor of Computational Biology, University of Auckland

Verified email at cs.auckland.ac.nz - Homepage

Phylogenetics Evolutionary Biology Molecular Evolution Computational Biology Computer Science


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Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data M Kearse, R Moir, A Wilson, S Stones-Havas, M Cheung, S Sturrock, ... Bioinformatics 28 (12), 1647-1649, 2012	19246	2012
BEAST: Bayesian evolutionary analysis by sampling trees A Drummond, A Rambaut BMC evolutionary biology 7 (1), 214, 2007	14009	2007
Tracer v1. 5.0 A Rambaut, AJ Drummond	13485*	2009
Bayesian phylogenetics with BEAUti and the BEAST 1.7 AJ Drummond, MA Suchard, D Xie, A Rambaut Molecular biology and evolution 29 (8), 1969-1973, 2012	10828	2012
Posterior summarization in Bayesian phylogenetics using Tracer 1.7 A Rambaut, AJ Drummond, D Xie, G Baele, MA Suchard Systematic biology 67 (5), 901-904, 2018	8273	2018
Relaxed phylogenetics and dating with confidence AJ Drummond, SYW Ho, MJ Phillips, A Rambaut PLoS biology 4 (5), e88, 2006	6677	2006
BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS Comput Biol 10 (4), e1003537, 2014	6353	2014
Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular Biology and Evolution 22 (5), 1185-1192, 2005	3393	2005
Geneious, version 5.4 AJ Drummond, B Ashton, S Buxton, M Cheung, A Cooper, C Duran, ... Geneious, Auckland, New Zealand, 2011	3204*	2011
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	3075	2019
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 MA Suchard, P Lemey, G Baele, DL Ayres, AJ Drummond, A Rambaut Virus evolution 4 (1), vey016, 2018	2984	2018
Bayesian inference of species trees from multilocus data J Heled, AJ Drummond Molecular Biology and Evolution 27 (3), 570-580, 2010	2679	2010
FigTree version 1.3. 1 [computer program] A Rambaut, AJ Drummond Website http://tree. bio. ed. ac. uk/software/figtree/, last accessed …, 2009	2486*	2009
Bayesian phylogeography finds its roots P Lemey, A Rambaut, AJ Drummond, MA Suchard PLoS computational biology 5 (9), e1000520, 2009	1820	2009
Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data AJ Drummond, GK Nicholls, AG Rodrigo, W Solomon Genetics 161 (3), 1307, 2002	1166	2002
Time dependency of molecular rate estimates and systematic overestimation of recent divergence times SYW Ho, MJ Phillips, A Cooper, AJ Drummond Molecular biology and evolution 22 (7), 1561-1568, 2005	1141	2005
Tracer v1. 6 http://beast. bio. ed. ac. uk A Rambaut, AJ Drummond, M Suchard Tracer, 2007	1027*	2007
Language phylogenies reveal expansion pulses and pauses in Pacific settlement RD Gray, AJ Drummond, SJ Greenhill Science 323 (5913), 479, 2009	900	2009
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012	819	2012
Bayesian inference of population size history from multiple loci J Heled, A Drummond BMC Evolutionary Biology 8 (1), 289, 2008	805	2008

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