Remco Bouckaert

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Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Joseph HeledAuckland UniversityVerified email at cs.auckland.ac.nz
Denise KühnertRobert Koch Institut & Max Planck Institute of GeoanthropologyVerified email at shh.mpg.de
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
Eibe FrankProfessor, Department of Computer Science, University of WaikatoVerified email at cs.waikato.ac.nz
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Simon J GreenhillUniversity of Auckland & Max Planck Institute for Evolutionary AnthropologyVerified email at simon.net.nz
Quentin AtkinsonUniversity of AucklandVerified email at auckland.ac.nz
Mark HallHonorary Research Associate, University of Waikato, New ZealandVerified email at cs.waikato.ac.nz
David BryantUniversity of OtagoVerified email at otago.ac.nz
Michael DunnUppsala UniversityVerified email at lingfil.uu.se
Geoffrey HolmesUniversity of WaikatoVerified email at waikato.ac.nz
Adam LeachéUniversity of Washington, Department of Biology & Burke MuseumVerified email at uw.edu
Bernhard PfahringerProfessor of Computer Science, University of WaikatoVerified email at waikato.ac.nz
Joe FelsensteinProfessor of Genome Sciences, and Professor of Biology, University of Washington, SeattleVerified email at gs.washington.edu
Philippe LemeyFull Professor, KU LeuvenVerified email at kuleuven.be
Volodymyr M. MininProfessor of Statistics, University of California, IrvineVerified email at uci.edu
Ian H. WittenProfessor of Computer Science, University of Waikato, New ZealandVerified email at waikato.ac.nz
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz

Remco Bouckaert

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Verified email at cs.auckland.ac.nz - Homepage


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BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS computational biology 10 (4), e1003537, 2014	6466	2014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	3219	2019
Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis D Bryant, R Bouckaert, J Felsenstein, NA Rosenberg, A RoyChoudhury Molecular biology and evolution 29 (8), 1917-1932, 2012	973	2012
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012	829	2012
bModelTest: Bayesian phylogenetic site model averaging and model comparison RR Bouckaert, AJ Drummond BMC evolutionary biology 17, 1-11, 2017	769	2017
DensiTree: making sense of sets of phylogenetic trees RR Bouckaert Bioinformatics 26 (10), 1372-1373, 2010	703	2010
WEKA manual for version 3-9-1 RR Bouckaert, E Frank, M Hall, R Kirkby, P Reutemann, A Seewald, ... University of Waikato: Hamilton, New Zealand, 1-341, 2016	642*	2016
Bayesian evolutionary analysis with BEAST AJ Drummond, RR Bouckaert Cambridge University Press, 2015	600	2015
Evaluating the replicability of significance tests for comparing learning algorithms RR Bouckaert, E Frank Pacific-Asia conference on knowledge discovery and data mining, 3-12, 2004	491	2004
Species delimitation using genome-wide SNP data AD Leaché, MK Fujita, VN Minin, RR Bouckaert Systematic biology 63 (4), 534-542, 2014	480	2014
WEKA---Experiences with a Java Open-Source Project RR Bouckaert, E Frank, MA Hall, G Holmes, B Pfahringer, P Reutemann, ... The Journal of Machine Learning Research 11, 2533-2541, 2010	462	2010
StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates HA Ogilvie, RR Bouckaert, AJ Drummond Molecular biology and evolution 34 (8), 2101-2114, 2017	461	2017
Bayesian network classifiers in weka RR Bouckaert Department of Computer Science, 2004	431*	2004
Bayesian belief networks: from construction to inference RR Bouckaert	367	1995
Naive bayes for text classification with unbalanced classes E Frank, RR Bouckaert Knowledge Discovery in Databases: PKDD 2006: 10th European Conference on …, 2006	325	2006
Choosing between two learning algorithms based on calibrated tests RR Bouckaert Proceedings of the Twentieth International Conference on International …, 2003	234	2003
Probabilistic network construction using the minimum description length principle RR Bouckaert European conference on symbolic and quantitative approaches to reasoning and …, 1993	232	1993
DensiTree 2: Seeing trees through the forest RR Bouckaert, J Heled BioRxiv, 012401, 2014	225	2014
Properties of Bayesian belief network learning algorithms RR Bouckaert Uncertainty in Artificial Intelligence, 102-109, 1994	187	1994
Model selection and parameter inference in phylogenetics using nested sampling PM Russel, BJ Brewer, S Klaere, RR Bouckaert Systematic biology 68 (2), 219-233, 2019	158	2019

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