Remco Bouckaert

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Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Joseph HeledAuckland UniversityVerified email at cs.auckland.ac.nz
Eibe FrankProfessor, Department of Computer Science, University of WaikatoVerified email at cs.waikato.ac.nz
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Mark HallHonorary Research Associate, University of Waikato, New ZealandVerified email at cs.waikato.ac.nz
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
Denise KühnertMax Planck Institute for the Science of Human HistoryVerified email at shh.mpg.de
Simon J GreenhillARC Centre of Excellence for the Dynamics of Language, Max Planck Institute for the Science of HumanVerified email at simon.net.nz
Quentin AtkinsonUniversity of AucklandVerified email at auckland.ac.nz
Geoffrey HolmesUniversity of WaikatoVerified email at waikato.ac.nz
Bernhard PfahringerProfessor of Computer Science, University of WaikatoVerified email at waikato.ac.nz
Michael DunnUppsala UniversityVerified email at lingfil.uu.se
David BryantUniversity of OtagoVerified email at otago.ac.nz
Adam LeachéUniversity of Washington, Department of Biology & Burke MuseumVerified email at uw.edu
Philippe LemeyAssociate Professor, KU LeuvenVerified email at kuleuven.be
Joe FelsensteinProfessor of Genome Sciences, and Professor of Biology, University of Washington, SeattleVerified email at gs.washington.edu
Ian H. WittenProfessor of Computer Science, University of Waikato, New ZealandVerified email at cs.waikato.ac.nz
Vladimir N. MininProfessor of Statistics, University of California, IrvineVerified email at uci.edu
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz

Remco Bouckaert

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Verified email at cs.auckland.ac.nz - Homepage


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BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS Comput Biol 10 (4), e1003537, 2014	4064	2014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	616	2019
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012	609	2012
Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis D Bryant, R Bouckaert, J Felsenstein, NA Rosenberg, A RoyChoudhury Molecular biology and evolution 29 (8), 1917-1932, 2012	595	2012
Weka manual for version 3-6-0 RR Bouckaert, E Frank, M Hall, R Kirkby, P Reutemann, A Seewald, ... University of Waikato, Hamilton, New Zealand 2, 2008	449*	2008
DensiTree: making sense of sets of phylogenetic trees RR Bouckaert Bioinformatics 26 (10), 1372-1373, 2010	442	2010
WEKA---Experiences with a Java Open-Source Project RR Bouckaert, E Frank, MA Hall, G Holmes, B Pfahringer, P Reutemann, ... The Journal of Machine Learning Research 11, 2533-2541, 2010	394	2010
Bayesian evolutionary analysis with BEAST AJ Drummond, RR Bouckaert Cambridge University Press, 2015	363	2015
Bayesian network classifiers in weka RR Bouckaert Department of Computer Science, 2004	362*	2004
bModelTest: Bayesian phylogenetic site model averaging and model comparison RR Bouckaert, AJ Drummond BMC evolutionary biology 17 (1), 1-11, 2017	309	2017
Species delimitation using genome-wide SNP data AD Leaché, MK Fujita, VN Minin, RR Bouckaert Systematic biology 63 (4), 534-542, 2014	299	2014
Bayesian belief networks: from construction to inference RR Bouckaert	296	1995
Evaluating the replicability of significance tests for comparing learning algorithms RR Bouckaert, E Frank Pacific-Asia Conference on Knowledge Discovery and Data Mining, 3-12, 2004	283	2004
Probabilistic network construction using the minimum description length principle RR Bouckaert European conference on symbolic and quantitative approaches to reasoning and …, 1993	238	1993
Naive bayes for text classification with unbalanced classes E Frank, RR Bouckaert European Conference on Principles of Data Mining and Knowledge Discovery …, 2006	232	2006
StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates HA Ogilvie, RR Bouckaert, AJ Drummond Molecular biology and evolution 34 (8), 2101-2114, 2017	216	2017
Choosing between two learning algorithms based on calibrated tests RR Bouckaert ICML 3, 51-58, 2003	187	2003
Properties of Bayesian belief network learning algorithms RR Bouckaert Uncertainty Proceedings 1994, 102-109, 1994	157	1994
DensiTree 2: Seeing trees through the forest RR Bouckaert, J Heled BioRxiv, 012401, 2014	112	2014
On chain graph models for description of conditional independence structures M Studeny, RR Bouckaert Annals of Statistics, 1434-1495, 1998	106	1998

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