Remco Bouckaert

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Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Joseph HeledAuckland UniversityVerified email at cs.auckland.ac.nz
Eibe FrankProfessor, Department of Computer Science, University of WaikatoVerified email at cs.waikato.ac.nz
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Denise KühnertMax Planck Institute for the Science of Human HistoryVerified email at shh.mpg.de
Mark HallHonorary Research Associate, University of Waikato, New ZealandVerified email at cs.waikato.ac.nz
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
Simon J GreenhillARC Centre of Excellence for the Dynamics of Language, Max Planck Institute for the Science of HumanVerified email at simon.net.nz
Quentin AtkinsonUniversity of AucklandVerified email at auckland.ac.nz
Michael DunnUppsala UniversityVerified email at lingfil.uu.se
Geoffrey HolmesUniversity of WaikatoVerified email at waikato.ac.nz
David BryantUniversity of OtagoVerified email at otago.ac.nz
Bernhard PfahringerProfessor of Computer Science, University of WaikatoVerified email at waikato.ac.nz
Adam LeachéUniversity of Washington, Department of Biology & Burke MuseumVerified email at uw.edu
Joe FelsensteinProfessor of Genome Sciences, and Professor of Biology, University of Washington, SeattleVerified email at gs.washington.edu
Philippe LemeyAssociate Professor, KU LeuvenVerified email at kuleuven.be
Ian H. WittenProfessor of Computer Science, University of Waikato, New ZealandVerified email at waikato.ac.nz
Vladimir N. MininProfessor of Statistics, University of California, IrvineVerified email at uci.edu
Prof. Mike SteelUniversity of Canterbury, New ZealandVerified email at canterbury.ac.nz

Remco Bouckaert

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Verified email at cs.auckland.ac.nz - Homepage


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BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS computational biology 10 (4), e1003537, 2014	5107	2014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	1592	2019
Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis D Bryant, R Bouckaert, J Felsenstein, NA Rosenberg, A RoyChoudhury Molecular biology and evolution 29 (8), 1917-1932, 2012	753	2012
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012	712	2012
DensiTree: making sense of sets of phylogenetic trees RR Bouckaert Bioinformatics 26 (10), 1372-1373, 2010	535	2010
Weka manual for version 3-6-0 RR Bouckaert, E Frank, M Hall, R Kirkby, P Reutemann, A Seewald, ... University of Waikato, Hamilton, New Zealand 2, 2008	526*	2008
bModelTest: Bayesian phylogenetic site model averaging and model comparison RR Bouckaert, AJ Drummond BMC evolutionary biology 17 (1), 1-11, 2017	504	2017
Bayesian evolutionary analysis with BEAST AJ Drummond, RR Bouckaert Cambridge University Press, 2015	475	2015
WEKA---Experiences with a Java Open-Source Project RR Bouckaert, E Frank, MA Hall, G Holmes, B Pfahringer, P Reutemann, ... The Journal of Machine Learning Research 11, 2533-2541, 2010	418	2010
Bayesian network classifiers in weka RR Bouckaert Department of Computer Science, 2004	395*	2004
Species delimitation using genome-wide SNP data AD Leaché, MK Fujita, VN Minin, RR Bouckaert Systematic biology 63 (4), 534-542, 2014	363	2014
Evaluating the replicability of significance tests for comparing learning algorithms RR Bouckaert, E Frank Pacific-Asia conference on knowledge discovery and data mining, 3-12, 2004	354	2004
Bayesian belief networks: from construction to inference RR Bouckaert	331	1995
StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates HA Ogilvie, RR Bouckaert, AJ Drummond Molecular biology and evolution 34 (8), 2101-2114, 2017	321	2017
Naive bayes for text classification with unbalanced classes E Frank, RR Bouckaert European Conference on Principles of Data Mining and Knowledge Discovery …, 2006	276	2006
Probabilistic network construction using the minimum description length principle RR Bouckaert European conference on symbolic and quantitative approaches to reasoning and …, 1993	252	1993
Choosing between two learning algorithms based on calibrated tests RR Bouckaert ICML 3, 51-58, 2003	202	2003
Properties of Bayesian belief network learning algorithms RR Bouckaert Uncertainty Proceedings 1994, 102-109, 1994	170	1994
DensiTree 2: Seeing trees through the forest RR Bouckaert, J Heled BioRxiv, 012401, 2014	169	2014
Looking for trees in the forest: summary tree from posterior samples J Heled, RR Bouckaert BMC evolutionary biology 13 (1), 1-11, 2013	120	2013

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