Murray Cox

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Herawati SudoyoEijkman Institute for Molecular Biology (1993-2021); Mochtar Riady Institute for NanotechnologyVerified email at mrinstitute.org
Steve LansingCenter for Advanced Study in Behavioral Sciences, StanfordVerified email at santafe.edu
Michael HammerBIO5 Institute, University of ArizonaVerified email at email.arizona.edu
Francois-Xavier RICAUTResearcher in Anthropobiology, CNRS, University of ToulouseVerified email at univ-tlse3.fr
D. Barry ScottEmeritus Professor, Massey UniversityVerified email at massey.ac.nz
Pradiptajati KusumaMochtar Riady Institute for Nanotechnology, IndonesiaVerified email at mrinstitute.org
Nicolas BRUCATOCNRS-University of Toulouse III, Centre de Recherche sur la Biodiversité et l'EnvironnementVerified email at univ-tlse3.fr
Patrick BiggsProfessor of Genomics & Computational Biology, Massey UniversityVerified email at massey.ac.nz
Georgi HudjashovUniversity of Tartu, EstoniaVerified email at ut.ee
Pierre-Yves DupontSenior bioinformatician, ESR, NZVerified email at esr.cri.nz
Guy JacobsUniversity of CambridgeVerified email at cam.ac.uk
Sean S. DowneyOhio State UniversityVerified email at osu.edu
David J WinterTechnical lead, pathogen genomics, ESR, New ZealandVerified email at esr.cri.nz
Rosie BradshawProfessor in Genetics, Massey UniversityVerified email at massey.ac.nz
August WoernerUNTHSCVerified email at unthsc.edu
Lauri SaagInstitute of Genomics, University of TartuVerified email at ut.ee
Austen GanleySchool of Biological Sciences, University of AucklandVerified email at auckland.ac.nz
Mait MetspaluEstonian Biocentre, Institute of Genomics, University of Tartu, Tartu, EstoniaVerified email at ut.ee
Fernando L MendezStanford UniversityVerified email at stanford.edu
Christopher L. SchardlProfessor of Plant Pathology, University of KentuckyVerified email at uky.edu

Murray Cox

Biological Data Analytics

Verified email at genomicus.com - Homepage

Biological Informatics Statistical Genomics Complex Systems


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SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data MP Cox, DA Peterson, PJ Biggs BMC Bioinformatics 11 (1), 485, 2010	1580	2010
A recent bottleneck of Y chromosome diversity coincides with a global change in culture M Karmin, L Saag, M Vicente, MAW Sayres, M Järve, UG Talas, S Rootsi, ... Genome Research 25 (4), 459-466, 2015	526	2015
Genomic analyses inform on migration events during the peopling of Eurasia L Pagani, DJ Lawson, E Jagoda, A Mörseburg, A Eriksson, M Mitt, ... Nature 538 (7624), 238-242, 2016	503	2016
Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the Clavicipitaceae reveals dynamics of alkaloid loci CL Schardl, CA Young, U Hesse, SG Amyotte, K Andreeva, PJ Calie, ... PLoS Genetics 9 (2), e1003323, 2013	453	2013
Dense sampling of bird diversity increases power of comparative genomics S Feng, J Stiller, Y Deng, J Armstrong, Q Fang, AH Reeve, D Xie, G Chen, ... Nature 587, 252-257, 2020	371	2020
The GenomeAsia 100K Project enables genetic discoveries across Asia JD Wall, E Stawiski, A Ratan, HL Kim, C Kim, R Gupta, K Suryamohan, ... Nature 576, 106-111, 2019	366	2019
Genomic insights into the peopling of the Southwest Pacific P Skoglund, C Posth, K Sirak, M Spriggs, F Valentin, S Bedford, GR Clark, ... Nature 538 (7626), 510-513, 2016	354	2016
The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry PJGM De Wit, A Van Der Burgt, B Ökmen, I Stergiopoulos, ... PLoS Genetics 8 (11), e1003088, 2012	301	2012
Multiple deeply divergent Denisovan ancestries in Papuans GS Jacobs, G Hudjashov, L Saag, P Kusuma, CC Darusallam, DJ Lawson, ... Cell 177, 1010-1021, 2019	262	2019
Recombination-filtered genomic datasets by information maximization AE Woerner, MP Cox, MF Hammer Bioinformatics 23 (14), 1851-1853, 2007	228	2007
Fungal endophyte infection of ryegrass reprograms host metabolism and alters development PY Dupont, CJ Eaton, JJ Wargent, S Fechtner, P Solomon, J Schmid, ... New Phytologist 208 (4), 1227-1240, 2015	203	2015
What triggers grass endophytes to switch from mutualism to pathogenism? CJ Eaton, MP Cox, B Scott Plant Science 180 (2), 190-195, 2011	200	2011
Sex-biased evolutionary forces shape genomic patterns of human diversity MF Hammer, FL Mendez, MP Cox, AE Woerner, JD Wall PLoS Genetics 4 (9), e1000202, 2008	197	2008
Major east–west division underlies Y chromosome stratification across Indonesia TM Karafet, B Hallmark, MP Cox, H Sudoyo, S Downey, JS Lansing, ... Molecular Biology and Evolution 27 (8), 1833-1844, 2010	193	2010
The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific MK Tumonggor, TM Karafet, B Hallmark, JS Lansing, H Sudoyo, ... Journal of Human Genetics 58 (3), 165-173, 2013	191	2013
Disruption of signaling in a fungal-grass symbiosis leads to pathogenesis C Eaton, M Cox, B Ambrose, M Becker, U Hesse, C Schardl, B Scott Plant Physiology 153, 1780-1794, 2010	148	2010
Breaking free: the genomics of allopolyploidy-facilitated niche expansion in white clover AG Griffiths, R Moraga, M Tausen, V Gupta, TP Bilton, MA Campbell, ... The Plant Cell 31, 1466-1487, 2019	121	2019
A small cohort of Island Southeast Asian women founded Madagascar MP Cox, MG Nelson, MK Tumonggor, FX Ricaut, H Sudoyo Proceedings of the Royal Society of London B: Biological Sciences 279, 2761-2768, 2012	114	2012
Coevolution of languages and genes on the island of Sumba, eastern Indonesia JS Lansing, MP Cox, SS Downey, BM Gabler, B Hallmark, TM Karafet, ... Proceedings of the National Academy of Sciences USA 104 (41), 16022-16026, 2007	112	2007
The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes MF Hammer, AE Woerner, FL Mendez, JC Watkins, MP Cox, JD Wall Nature Genetics 42 (10), 830-831, 2010	111	2010

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