Sean R. Eddy
Sean R. Eddy
Verified email at fas.harvard.edu - Homepage
Title
Cited by
Cited by
Year
Initial sequencing and analysis of the human genome
ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, ...
Macmillan Publishers Ltd., 2001
270672001
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
TM Lowe, SR Eddy
Nucleic acids research 25 (5), 955-964, 1997
95391997
Initial sequencing and comparative analysis of the mouse genome
AT Chinwalla, LL Cook, KD Delehaunty, GA Fewell, LA Fulton, RS Fulton, ...
Nature 420 (6915), 520-563, 2002
7644*2002
Biological sequence analysis: probabilistic models of proteins and nucleic acids
R Durbin, SR Eddy, A Krogh, G Mitchison
Cambridge university press, 1998
75841998
Profile hidden Markov models.
SR Eddy
Bioinformatics (Oxford, England) 14 (9), 755-763, 1998
57781998
Pfam: the protein families database
RD Finn, A Bateman, J Clements, P Coggill, RY Eberhardt, SR Eddy, ...
Nucleic acids research 42 (D1), D222-D230, 2014
48802014
The Pfam protein families database: towards a more sustainable future
RD Finn, P Coggill, RY Eberhardt, SR Eddy, J Mistry, AL Mitchell, ...
Nucleic acids research 44 (D1), D279-D285, 2016
42192016
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2012
38722012
The Pfam protein families database
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ...
Nucleic acids research 32 (suppl_1), D138-D141, 2004
37862004
HMMER web server: interactive sequence similarity searching
RD Finn, J Clements, SR Eddy
Nucleic acids research 39 (suppl_2), W29-W37, 2011
35292011
Accelerated profile HMM searches
SR Eddy
PLoS computational biology 7 (10), e1002195, 2011
34832011
The Pfam protein families database
RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ...
Nucleic acids research 38 (suppl_1), D211-D222, 2009
32422009
The Pfam protein families database
RD Finn, J Tate, J Mistry, PC Coggill, SJ Sammut, HR Hotz, G Ceric, ...
Nucleic acids research 36 (suppl_1), D281-D288, 2007
26632007
The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
25972002
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
24962006
The Pfam protein families database in 2019
S El-Gebali, J Mistry, A Bateman, SR Eddy, A Luciani, SC Potter, ...
Nucleic acids research 47 (D1), D427-D432, 2019
24622019
A uniform system for microRNA annotation
V Ambros, B Bartel, DP Bartel, CB Burge, JC Carrington, X Chen, ...
Rna 9 (3), 277-279, 2003
22182003
Non–coding RNA genes and the modern RNA world
SR Eddy
Nature Reviews Genetics 2 (12), 919-929, 2001
16422001
The Pfam protein families database
A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer
Nucleic acids research 28 (1), 263-266, 2000
15242000
Rfam: an RNA family database
S Griffiths-Jones, A Bateman, M Marshall, A Khanna, SR Eddy
Nucleic acids research 31 (1), 439-441, 2003
14712003
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Articles 1–20