Sean R. Eddy
Sean R. Eddy
Verified email at fas.harvard.edu - Homepage
TitleCited byYear
Initial sequencing and analysis of the human genome
ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, ...
Macmillan Publishers Ltd., 2001
242272001
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
TM Lowe, SR Eddy
Nucleic acids research 25 (5), 955-964, 1997
81581997
Biological sequence analysis: probabilistic models of proteins and nucleic acids
R Durbin, SR Eddy, A Krogh, G Mitchison
Cambridge university press, 1998
71351998
Initial sequencing and comparative analysis of the mouse genome
Mouse Genome Sequencing Consortium
Nature 420 (6915), 520, 2002
67592002
Profile hidden Markov models.
SR Eddy
Bioinformatics (Oxford, England) 14 (9), 755-763, 1998
51191998
The Pfam protein families database
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ...
Nucleic acids research 32 (suppl_1), D138-D141, 2004
3743*2004
Pfam: the protein families database
RD Finn, A Bateman, J Clements, P Coggill, RY Eberhardt, SR Eddy, ...
Nucleic acids research 42 (D1), D222-D230, 2013
36622013
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2011
34652011
The Pfam protein families database
RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ...
Nucleic acids research 38 (suppl_1), D211-D222, 2009
30942009
The Pfam protein families database: towards a more sustainable future
RD Finn, P Coggill, RY Eberhardt, SR Eddy, J Mistry, AL Mitchell, ...
Nucleic acids research 44 (D1), D279-D285, 2015
30332015
HMMER web server: interactive sequence similarity searching
RD Finn, J Clements, SR Eddy
Nucleic acids research 39 (suppl_2), W29-W37, 2011
25382011
The Pfam protein families database
RD Finn, J Tate, J Mistry, PC Coggill, SJ Sammut, HR Hotz, G Ceric, ...
Nucleic acids research 36 (suppl_1), D281-D288, 2007
25012007
The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
24272002
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
23322006
Accelerated profile HMM searches
SR Eddy
PLoS computational biology 7 (10), e1002195, 2011
22892011
A uniform system for microRNA annotation
V Ambros, B Bartel, DP Bartel, CB Burge, JC Carrington, X Chen, ...
Rna 9 (3), 277-279, 2003
19882003
Non–coding RNA genes and the modern RNA world
SR Eddy
Nature Reviews Genetics 2 (12), 919, 2001
14382001
The Pfam protein families database
A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer
Nucleic acids research 28 (1), 263-266, 2000
14122000
Pfam: a comprehensive database of protein domain families based on seed alignments
ELL Sonnhammer, SR Eddy, R Durbin
Proteins: Structure, Function, and Bioinformatics 28 (3), 405-420, 1997
12791997
Rfam: annotating non-coding RNAs in complete genomes
S Griffiths-Jones, S Moxon, M Marshall, A Khanna, SR Eddy, A Bateman
Nucleic acids research 33 (suppl_1), D121-D124, 2005
12722005
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