Sean R. Eddy - Google Scholar

Cited by

	All	Since 2015
Citations	125432	46105
h-index	91	64
i10-index	129	110

9000

4500

2250

6750

1999200020012002200320042005200620072008200920102011201220132014201520162017201820192020442 844 2260 3254 4209 4875 5240 5414 5624 5641 5713 5963 6090 6959 6949 7559 7519 8158 7941 8003 8470 5982

Co-authors

Alex BatemanHead of Protein Sequence Resources, EMBL-EBIVerified email at ebi.ac.uk
Robert D. FinnSequence Families Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SD, UKVerified email at ebi.ac.uk
Erik SonnhammerStockholm Bioinformatics Centre, DBB, Stockholm University, Science for Life LaboratoryVerified email at scilifelab.se
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
Jody ClementsSenior Software Engineer, Janelia Farm Research Campus, HHMIVerified email at janelia.hhmi.org
Eric NawrockiNational Center for Biotechnology (NCBI), NLM, NIHVerified email at ncbi.nlm.nih.gov
Sam Griffiths-JonesFaculty of Biology, Medicine and Health. University of ManchesterVerified email at manchester.ac.uk
Elena RivasMolecular and Cell Biology, Harvard UniversityVerified email at fas.harvard.edu
Ewan BirneyDirector, EMBL-EBIVerified email at ebi.ac.uk
Todd LoweProfessor of Biomolecular Engineering, UC Santa Cruz Genomics Institute, UCSC RNA Center, UniversityVerified email at ucsc.edu
Diana L KolbeResearch Scientist, IIHG, University of IowaVerified email at uiowa.edu
Zhirong BaoDevelopmental Biology Program, Sloan-Kettering InstituteVerified email at mskcc.org
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Travis WheelerAssociate Professor, Dept Computer Science, U. MontanaVerified email at traviswheeler.com
Fred P. DavisCelsius TherapeuticsVerified email at nih.gov
Robert KleinAssociate Professor, Genetics and Genomic Sciences, Icahn School of Medicine at Mt. SinaiVerified email at mssm.edu
Robin DowellAssociate Professor, University of Colorado BoulderVerified email at colorado.edu
Sarah BurgeDepartment of Oncology, University of CambridgeVerified email at cam.ac.uk
Christian ZmasekResearcher at J. Craig Venter InstituteVerified email at jcvi.org
Jeremy NathansProfessor of Molecular Biology and Genetics, Johns Hopkins UniversityVerified email at jhmi.edu

Sean R. Eddy

HHMI & Harvard University

Verified email at fas.harvard.edu - Homepage

Computational genomics RNA biology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Initial sequencing and analysis of the human genome International Human Genome Sequencing Consortium Nature 409, 860-921, 2001	25241*	2001
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence TM Lowe, SR Eddy Nucleic acids research 25 (5), 955-964, 1997	8702	1997
Biological sequence analysis: probabilistic models of proteins and nucleic acids R Durbin, SR Eddy, A Krogh, G Mitchison Cambridge university press, 1998	7215	1998
Initial sequencing and comparative analysis of the mouse genome RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, ... Nature 420 (6915), 520-562, 2002	7089	2002
Profile hidden Markov models. SR Eddy Bioinformatics (Oxford, England) 14 (9), 755-763, 1998	5428	1998
Pfam: the protein families database RD Finn, A Bateman, J Clements, P Coggill, RY Eberhardt, SR Eddy, ... Nucleic acids research 42 (D1), D222-D230, 2014	4232	2014
The Pfam protein families database A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ... Nucleic acids research 32 (suppl_1), D138-D141, 2004	3873*	2004
The Pfam protein families database M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ... Nucleic acids research 40 (D1), D290-D301, 2012	3637	2012
The Pfam protein families database: towards a more sustainable future RD Finn, P Coggill, RY Eberhardt, SR Eddy, J Mistry, AL Mitchell, ... Nucleic acids research 44 (D1), D279-D285, 2016	3539	2016
The Pfam protein families database RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ... Nucleic acids research 38 (suppl_1), D211-D222, 2009	3098	2009
HMMER web server: interactive sequence similarity searching RD Finn, J Clements, SR Eddy Nucleic acids research 39 (suppl_2), W29-W37, 2011	2938	2011
Accelerated profile HMM searches SR Eddy PLoS Comput Biol 7 (10), e1002195, 2011	2681	2011
The Pfam protein families database A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ... Nucleic acids research 30 (1), 276-280, 2002	2505	2002
The Pfam protein families database RD Finn, J Tate, J Mistry, PC Coggill, SJ Sammut, HR Hotz, G Ceric, ... Nucleic acids research 36 (suppl_1), D281-D288, 2007	2424	2007
Pfam: clans, web tools and services RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ... Nucleic acids research 34 (suppl_1), D247-D251, 2006	2388	2006
A uniform system for microRNA annotation V Ambros, B Bartel, DP Bartel, CB Burge, JC Carrington, X Chen, ... Rna 9 (3), 277-279, 2003	2070	2003
Non–coding RNA genes and the modern RNA world SR Eddy Nature Reviews Genetics 2 (12), 919-929, 2001	1502	2001
The Pfam protein families database A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer Nucleic acids research 28 (1), 263-266, 2000	1454	2000
Rfam: an RNA family database S Griffiths-Jones, A Bateman, M Marshall, A Khanna, SR Eddy Nucleic acids research 31 (1), 439-441, 2003	1342	2003
Rfam: annotating non-coding RNAs in complete genomes S Griffiths-Jones, S Moxon, M Marshall, A Khanna, SR Eddy, A Bateman Nucleic acids research 33 (suppl_1), D121-D124, 2005	1340	2005

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Upload PDF

Follow this author

Cited by

Co-authors