Gene Regulatory Network Inference from Single-Cell Data Using Multivariate Information Measures TE Chan, MPH Stumpf, AC Babtie Cell Systems 5 (3), 251-267. e3, 2017 | 554 | 2017 |
What makes an enzyme promiscuous? A Babtie, N Tokuriki, F Hollfelder Current opinion in chemical biology 14 (2), 200-207, 2010 | 263 | 2010 |
Stem Cell Differentiation as a Non-Markov Stochastic Process PS Stumpf, RCG Smith, M Lenz, A Schuppert, FJ Müller, A Babtie, ... Cell Systems 5 (3), 268-282. e7, 2017 | 200 | 2017 |
Simultaneous determination of gene expression and enzymatic activity in individual bacterial cells in microdroplet compartments J Shim, LF Olguin, G Whyte, D Scott, A Babtie, C Abell, WTS Huck, ... Journal of the American Chemical Society 131 (42), 15251-15256, 2009 | 196 | 2009 |
An efficient, multiply promiscuous hydrolase in the alkaline phosphatase superfamily B van Loo, S Jonas, AC Babtie, A Benjdia, O Berteau, M Hyvönen, ... Proceedings of the National Academy of Sciences 107 (7), 2740-2745, 2010 | 122 | 2010 |
Topological sensitivity analysis for systems biology AC Babtie, P Kirk, MPH Stumpf Proceedings of the National Academy of Sciences 111 (52), 18507-18512, 2014 | 117 | 2014 |
How to deal with parameters for whole-cell modelling AC Babtie, MPH Stumpf Journal of The Royal Society Interface 14 (133), 20170237, 2017 | 101 | 2017 |
Systems biology (un) certainties PDW Kirk, AC Babtie, MPH Stumpf Science 350 (6259), 386-388, 2015 | 96 | 2015 |
Efficient catalytic promiscuity for chemically distinct reactions AC Babtie, S Bandyopadhyay, LF Olguin, F Hollfelder Angewandte Chemie International Edition 48 (20), 3692-3694, 2009 | 63 | 2009 |
Single-cell analyses and machine learning define hematopoietic progenitor and HSC-like cells derived from human PSCs A Fidanza, PS Stumpf, P Ramachandran, S Tamagno, A Babtie, ... Blood 136 (25), 2893-2904, 2020 | 53 | 2020 |
Learning regulatory models for cell development from single cell transcriptomic data AC Babtie, TE Chan, MPH Stumpf Current Opinion in Systems Biology 5, 72-81, 2017 | 42 | 2017 |
Metabolic engineering: enabling technology of a bio-based economy J Zhang, A Babtie, G Stephanopoulos Current Opinion in Chemical Engineering 1 (4), 355-362, 2012 | 23 | 2012 |
Kinetic and computational evidence for an intermediate in the hydrolysis of sulfonate esters AC Babtie, MF Lima, AJ Kirby, F Hollfelder Organic & biomolecular chemistry 10 (40), 8095-8101, 2012 | 22 | 2012 |
MEANS: python package for Moment Expansion Approximation, iNference and Simulation S Fan, Q Geissmann, E Lakatos, S Lukauskas, A Ale, AC Babtie, ... Bioinformatics 32 (18), 2863-2865, 2016 | 19 | 2016 |
Empirical Bayes meets information theoretical network reconstruction from single cell data TE Chan, AV Pallaseni, AC Babtie, KR McEwen, MPH Stumpf BioRxiv, 264853, 2018 | 16 | 2018 |
Model of host-pathogen interaction dynamics links in vivo optical imaging and immune responses A Ale, VF Crepin, JW Collins, N Constantinou, M Habibzay, AC Babtie, ... Infection and immunity 85 (1), e00606-16, 2017 | 10 | 2017 |
Gene regulatory network inference AC Babtie, MPH Stumpf, T Thorne Elsevier, 2019 | 4 | 2019 |
Gene regulatory networks from single cell data for exploring cell fate decisions TE Chan, MPH Stumpf, AC Babtie Computational Stem Cell Biology, 211-238, 2019 | 2 | 2019 |
Modelling heterogeneous intracellular networks at the cellular scale AC Babtie Current Opinion in Systems Biology 16, 10-16, 2019 | | 2019 |
Exploring catalytic promiscuity and mechanism in the alkaline phosphatase superfamily AC Babtie University of Cambridge, 2010 | | 2010 |