Timothy T Perkins
TitleCited byYear
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
GC Langridge, MD Phan, DJ Turner, TT Perkins, L Parts, J Haase, ...
Genome research 19 (12), 2308-2316, 2009
4062009
A strand-specific RNA–Seq analysis of the transcriptome of the typhoid bacillus salmonella typhi
TT Perkins, RA Kingsley, MC Fookes, PP Gardner, KD James, L Yu, ...
PLoS genetics 5 (7), e1000569, 2009
2402009
Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis
KB Arnvig, I Comas, NR Thomson, J Houghton, HI Boshoff, NJ Croucher, ...
PLoS pathogens 7 (11), e1002342, 2011
1872011
A simple method for directional transcriptome sequencing using Illumina technology
NJ Croucher, MC Fookes, TT Perkins, DJ Turner, SB Marguerat, T Keane, ...
Nucleic acids research 37 (22), e148-e148, 2009
1082009
Diversity and evolution in the genome of Clostridium difficile
DR Knight, B Elliott, BJ Chang, TT Perkins, TV Riley
Clinical microbiology reviews 28 (3), 721-741, 2015
1072015
Streptococcus agalactiae clones infecting humans were selected and fixed through the extensive use of tetracycline
V Da Cunha, MR Davies, PE Douarre, I Rosinski-Chupin, I Margarit, ...
Nature communications 5, 4544, 2014
1042014
Genome sequencing of disease and carriage isolates of nontypeable Haemophilus influenzae identifies discrete population structure
M De Chiara, D Hood, A Muzzi, DJ Pickard, T Perkins, M Pizza, G Dougan, ...
Proceedings of the National Academy of Sciences 111 (14), 5439-5444, 2014
652014
Transcriptional response in the peripheral blood of patients infected with Salmonella enterica serovar Typhi
LJ Thompson, SJ Dunstan, C Dolecek, T Perkins, D House, G Dougan, ...
Proceedings of the National Academy of Sciences 106 (52), 22433-22438, 2009
642009
Interaction of Salmonella enterica serovar Typhi with cultured epithelial cells: roles of surface structures in adhesion and invasion
A Bishop, D House, T Perkins, S Baker, RA Kingsley, G Dougan
Microbiology (Reading, England) 154 (Pt 7), 1914, 2008
642008
Helicobacter pylori eradication in Western Australia using novel quadruple therapy combinations
CY Tay, HM Windsor, F Thirriot, W Lu, C Conway, TT Perkins, BJ Marshall
Alimentary Pharmacology & Therapeutics, 2012
552012
Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptome
RR Chaudhuri, L Yu, A Kanji, TT Perkins, PP Gardner, J Choudhary, ...
Microbiology 157 (Pt 10), 2922, 2011
442011
ChIP‐seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization
TT Perkins, MR Davies, EJ Klemm, G Rowley, T Wileman, K James, ...
Molecular Microbiology, 2013
432013
A linear plasmid truncation induces unidirectional flagellar phase change in H:z66 positive Salmonella Typhi
S Baker, K Holt, S Whitehead, I Goodhead, T Perkins, B Stocker, J Hardy, ...
Molecular microbiology 66 (5), 1207-1218, 2007
352007
Comparative analysis of the full genome of Helicobacter pylori isolate Sahul64 identifies genes of high divergence
W Lu, MJ Wise, CY Tay, HM Windsor, BJ Marshall, C Peacock, T Perkins
Journal of bacteriology 196 (5), 1073-1083, 2014
252014
Comparative genomic analysis of Helicobacter pylori from Malaysia identifies three distinct lineages suggestive of differential evolution
N Kumar, V Mariappan, R Baddam, AK Lankapalli, S Shaik, KL Goh, ...
Nucleic acids research 43 (1), 324-335, 2014
212014
Choosing a benchtop sequencing machine to characterise Helicobacter pylori genomes
TT Perkins, CY Tay, F Thirriot, B Marshall
PloS one 8 (6), e67539, 2013
212013
Engaging students through assessment: The success and limitations of the ASPAL (Authentic Self and Peer Assessment for Learning) Model
SP Kearney, T Perkins
Journal of University Teaching and Learning Practice 11 (3), 2014
192014
Temporal changes in BEXSEROŽ antigen sequence type associated with genetic lineages of Neisseria meningitidis over a 15-year period in Western Australia
S Mowlaboccus, TT Perkins, H Smith, T Sloots, S Tozer, LJ Prempeh, ...
PLoS One 11 (6), e0158315, 2016
152016
Evaluation of the Cepheid Xpert C. difficile/Epi and meridian bioscience illumigene C. difficile assays for detecting Clostridium difficile ribotype 033 strains
GO Androga, AM McGovern, B Elliott, BJ Chang, TT Perkins, NF Foster, ...
Journal of clinical microbiology 53 (3), 973-975, 2015
152015
Divergence between the highly virulent zoonotic pathogen Helicobacter heilmannii and its closest relative, the low virulent Helicobacter ailurogastricus sp. nov.
M Joosten, S Lindén, M Rossi, CY Tay, E Skoog, M Padra, F Peters, ...
IAI 1300 (15), 2015
152015
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Articles 1–20