A comparative encyclopedia of DNA elements in the mouse genome. Nature 515, 355–364, 2014 | 1953 | 2014 |
Topologically associating domains are stable units of replication-timing regulation BD Pope, T Ryba, V Dileep, F Yue, W Wu, O Denas, DL Vera, Y Wang, ... Nature 515 (7527), 402-405, 2014 | 949 | 2014 |
An efficient index structure for string databases T Kahveci, AK Singh VLDB 1, 351-360, 2001 | 224 | 2001 |
Variable length queries for time series data T Kahveci, A Singh Proceedings 17th International Conference on Data Engineering, 273-282, 2001 | 194 | 2001 |
A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification B El Yacoubi, I Hatin, C Deutsch, T Kahveci, JP Rousset, D Iwata‐Reuyl, ... The EMBO journal 30 (5), 882-893, 2011 | 164 | 2011 |
Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells JC Rivera-Mulia, Q Buckley, T Sasaki, J Zimmerman, RA Didier, K Nazor, ... Genome research 25 (8), 1091-1103, 2015 | 159 | 2015 |
Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks D Marbach, S Roy, F Ay, PE Meyer, R Candeias, T Kahveci, CA Bristow, ... Genome research 22 (7), 1334-1349, 2012 | 145 | 2012 |
Distance-based clustering of CGH data J Liu, J Mohammed, J Carter, S Ranka, T Kahveci, M Baudis Bioinformatics 22 (16), 1971-1978, 2006 | 110 | 2006 |
Similarity searching for multi-attribute sequences T Kahveci, A Singh, A Gurel Proceedings 14th International Conference on Scientific and Statistical …, 2002 | 110 | 2002 |
SubMAP: aligning metabolic pathways with subnetwork mappings F Ay, M Kellis, T Kahveci Journal of computational biology 18 (3), 219-235, 2011 | 94 | 2011 |
Scalable steady state analysis of Boolean biological regulatory networks F Ay, F Xu, T Kahveci PloS one 4 (12), e7992, 2009 | 86 | 2009 |
Metabolomic analysis reveals extended metabolic consequences of marginal vitamin B-6 deficiency in healthy human subjects JF Gregory III, Y Park, Y Lamers, N Bandyopadhyay, YY Chi, K Lee, S Kim, ... PloS one 8 (6), e63544, 2013 | 71 | 2013 |
Classification and feature selection algorithms for multi-class CGH data J Liu, S Ranka, T Kahveci Bioinformatics 24 (13), i86-i95, 2008 | 67 | 2008 |
Mining metabolic networks for optimal drug targets P Sridhar, B Song, T Kahveci, S Ranka Biocomputing 2008, 291-302, 2008 | 64 | 2008 |
An iterative algorithm for metabolic network-based drug target identification P Sridhar, T Kahveci, S Ranka Biocomputing 2007, 88-99, 2007 | 63 | 2007 |
Reference-based indexing of sequence databases J Venkateswaran, D Lachwani, T Kahveci, C Jermaine Proceedings of the 32nd international conference on Very large data bases …, 2006 | 59 | 2006 |
Comparison of three calibration methods for modeling rice phenology Y Gao, D Wallach, B Liu, M Dingkuhn, KJ Boote, U Singh, S Asseng, ... Agricultural and Forest Meteorology 280, 107785, 2020 | 53 | 2020 |
PSI: indexing protein structures for fast similarity search O Camoglu, T Kahveci, AK Singh Bioinformatics 19 (suppl_1), i81-i83, 2003 | 51 | 2003 |
Optimizing similarity search for arbitrary length time series queries T Kahveci, AK Singh IEEE Transactions on Knowledge and Data Engineering 16 (4), 418-433, 2004 | 48 | 2004 |
Towards index-based similarity search for protein structure databases O Camoglu, T Kahveci, AK Singh Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE …, 2003 | 47 | 2003 |